dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01058
Location and strand information: 19845 - 21710 (-)
Family: GH5
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2489
Protein molecular weight: 70427.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01059
Location and strand information: 21827 - 22750 (-)
Family: null
Protein type: null
Protein description: Quinolinate synthase A

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01060
Location and strand information: 22768 - 24129 (-)
Family: 2.A.86.1.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01061
Location and strand information: 24220 - 25578 (-)
Family: 2.A.22.5.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01062
Location and strand information: 25727 - 28075 (+)
Family: null
Protein type: null
Protein description: ATP-dependent DNA helicase PcrA

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01063
Location and strand information: 28136 - 28285 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01064
Location and strand information: 28495 - 30873 (+)
Family: 3.A.9.1.2
Protein type: TC
Protein description: Negative regulator of genetic competence ClpC/MecB

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01065
Location and strand information: 31283 - 32359 (+)
Family: null
Protein type: null
Protein description: Tyrosine recombinase XerC

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01066
Location and strand information: 32511 - 33911 (+)
Family: 9.B.18.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01067
Location and strand information: 33919 - 34743 (+)
Family: GT2
Protein type: CAZyme
Protein description: UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase
Protein isoelectric point: 9.2354
Protein molecular weight: 32083.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01068
Location and strand information: 34740 - 35828 (+)
Family: GT4
Protein type: CAZyme
Protein description: GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase
Protein isoelectric point: 9.3354
Protein molecular weight: 41207.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01069
Location and strand information: 35834 - 36766 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01070
Location and strand information: 36788 - 37888 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01071
Location and strand information: 37990 - 39528 (+)
Family: 2.A.66.1.40
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01072
Location and strand information: 39544 - 40605 (+)
Family: null
Protein type: null
Protein description: UDP-N-acetylglucosamine 4-epimerase

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01073
Location and strand information: 40617 - 41849 (+)
Family: null
Protein type: null
Protein description: UDP-glucose 6-dehydrogenase

Gene clsuter ID: MGYG000000072_5|CGC1
Gene ID: MGYG000000072_01074
Location and strand information: 41863 - 43344 (+)
Family: 8.A.3.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000072_01058	hypothetical protein	CAZyme	19845	21710	-	GH5
MGYG000000072_01059	Quinolinate synthase A	null	21827	22750	-	NadA
MGYG000000072_01060	hypothetical protein	TC	22768	24129	-	2.A.86.1.8
MGYG000000072_01061	hypothetical protein	TC	24220	25578	-	2.A.22.5.3
MGYG000000072_01062	ATP-dependent DNA helicase PcrA	null	25727	28075	+	UvrD-helicase\| UvrD-helicase\| UvrD_C
MGYG000000072_01063	hypothetical protein	null	28136	28285	-	No domain
MGYG000000072_01064	Negative regulator of genetic competence ClpC/MecB	TC	28495	30873	+	3.A.9.1.2
MGYG000000072_01065	Tyrosine recombinase XerC	null	31283	32359	+	Phage_int_SAM_3\| Phage_integrase
MGYG000000072_01066	hypothetical protein	TC	32511	33911	+	9.B.18.1.3
MGYG000000072_01067	UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase	CAZyme	33919	34743	+	GT2
MGYG000000072_01068	GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase	CAZyme	34740	35828	+	GT4
MGYG000000072_01069	hypothetical protein	null	35834	36766	+	ATPgrasp_TupA
MGYG000000072_01070	hypothetical protein	null	36788	37888	+	EpsG
MGYG000000072_01071	hypothetical protein	TC	37990	39528	+	2.A.66.1.40
MGYG000000072_01072	UDP-N-acetylglucosamine 4-epimerase	null	39544	40605	+	Epimerase
MGYG000000072_01073	UDP-glucose 6-dehydrogenase	null	40617	41849	+	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000000072_01074	hypothetical protein	TC	41863	43344	+	8.A.3.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature