dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05007
Location and strand information: 55680 - 56666 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05008
Location and strand information: 56804 - 58315 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05009
Location and strand information: 58315 - 59319 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05010
Location and strand information: 59316 - 60320 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05011
Location and strand information: 60481 - 61629 (+)
Family: null
Protein type: null
Protein description: Alcohol dehydrogenase 2

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05012
Location and strand information: 61626 - 61940 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05013
Location and strand information: 61995 - 63359 (-)
Family: GH91
Protein type: CAZyme
Protein description: Inulin fructotransferase [DFA-I-forming]
Protein isoelectric point: 5.6483
Protein molecular weight: 49252.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05014
Location and strand information: 63464 - 64852 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05015
Location and strand information: 64924 - 65934 (-)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05016
Location and strand information: 66345 - 67631 (-)
Family: 1.B.15.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05017
Location and strand information: 67820 - 68413 (-)
Family: null
Protein type: null
Protein description: Galactoside O-acetyltransferase

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05018
Location and strand information: 68453 - 69718 (-)
Family: 2.A.1.5.4
Protein type: TC
Protein description: Melibiose permease

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05019
Location and strand information: 69760 - 71883 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 6.2082
Protein molecular weight: 80022.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05020
Location and strand information: 71998 - 72993 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator RafR

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05021
Location and strand information: 73069 - 73617 (-)
Family: HTH_3
Protein type: TF
Protein description: HTH-type transcriptional regulator SutR

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05022
Location and strand information: 73688 - 74377 (+)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05023
Location and strand information: 74377 - 74700 (+)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05024
Location and strand information: 74738 - 75766 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05025
Location and strand information: 75898 - 76449 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05026
Location and strand information: 76446 - 76883 (-)
Family: 4.A.7.1.1
Protein type: TC
Protein description: Ascorbate-specific PTS system EIIA component

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05027
Location and strand information: 76893 - 77162 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05028
Location and strand information: 77219 - 78061 (-)
Family: null
Protein type: null
Protein description: putative fructose-bisphosphate aldolase

Gene clsuter ID: MGYG000000107_11|CGC1
Gene ID: MGYG000000107_05029
Location and strand information: 78048 - 79415 (-)
Family: 4.A.7.1.4
Protein type: TC
Protein description: Ascorbate-specific PTS system EIIC component

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is melibiose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000107_05007	Autoinducer 2-binding protein LsrB	TC	55680	56666	+	3.A.1.2.9
MGYG000000107_05008	Ribose import ATP-binding protein RbsA	TC	56804	58315	+	3.A.1.2.9
MGYG000000107_05009	Ribose import permease protein RbsC	TC	58315	59319	+	3.A.1.2.9
MGYG000000107_05010	Autoinducer 2 import system permease protein LsrD	TC	59316	60320	+	3.A.1.2.8
MGYG000000107_05011	Alcohol dehydrogenase 2	null	60481	61629	+	Fe-ADH
MGYG000000107_05012	L-rhamnose mutarotase	null	61626	61940	+	rhaM
MGYG000000107_05013	Inulin fructotransferase [DFA-I-forming]	CAZyme	61995	63359	-	GH91
MGYG000000107_05014	Inner membrane symporter YicJ	TC	63464	64852	-	2.A.2.3.4
MGYG000000107_05015	Catabolite control protein A	TF	64924	65934	-	LacI
MGYG000000107_05016	hypothetical protein	TC	66345	67631	-	1.B.15.1.1
MGYG000000107_05017	Galactoside O-acetyltransferase	null	67820	68413	-	Mac\| Hexapep
MGYG000000107_05018	Melibiose permease	TC	68453	69718	-	2.A.1.5.4
MGYG000000107_05019	Alpha-galactosidase	CAZyme	69760	71883	-	GH36
MGYG000000107_05020	HTH-type transcriptional regulator RafR	TF	71998	72993	-	LacI
MGYG000000107_05021	HTH-type transcriptional regulator SutR	TF	73069	73617	-	HTH_3
MGYG000000107_05022	hypothetical protein	TC	73688	74377	+	2.A.78.2.3
MGYG000000107_05023	hypothetical protein	TC	74377	74700	+	2.A.78.2.3
MGYG000000107_05024	hypothetical protein	null	74738	75766	-	DUF3829
MGYG000000107_05025	hypothetical protein	null	75898	76449	-	No domain
MGYG000000107_05026	Ascorbate-specific PTS system EIIA component	TC	76446	76883	-	4.A.7.1.1
MGYG000000107_05027	hypothetical protein	null	76893	77162	-	No domain
MGYG000000107_05028	putative fructose-bisphosphate aldolase	null	77219	78061	-	F_bP_aldolase
MGYG000000107_05029	Ascorbate-specific PTS system EIIC component	TC	78048	79415	-	4.A.7.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature