dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01292
Location and strand information: 326572 - 328608 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1913
Protein molecular weight: 77599.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01293
Location and strand information: 328637 - 329812 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.552
Protein molecular weight: 44710.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01294
Location and strand information: 330017 - 330943 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01295
Location and strand information: 331000 - 332016 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor PurR

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01296
Location and strand information: 332210 - 333274 (+)
Family: 3.A.1.14.13
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01297
Location and strand information: 333258 - 334304 (+)
Family: 3.A.1.14.22
Protein type: TC
Protein description: putative siderophore transport system permease protein YfiZ

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01298
Location and strand information: 334301 - 335338 (+)
Family: 3.A.1.14.22
Protein type: TC
Protein description: putative siderophore transport system permease protein YfhA

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01299
Location and strand information: 335338 - 336141 (+)
Family: 3.A.1.14.22
Protein type: TC
Protein description: Ferric enterobactin transport ATP-binding protein FepC

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01300
Location and strand information: 336313 - 336621 (+)
Family: 4.A.2.1.22
Protein type: TC
Protein description: PTS system mannose-specific EIIBCA component

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01301
Location and strand information: 336661 - 337767 (+)
Family: 4.A.2.1.15
Protein type: TC
Protein description: PTS system fructose-specific EIIB'BC component

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01302
Location and strand information: 337736 - 338683 (+)
Family: null
Protein type: null
Protein description: D-tagatose-1,6-bisphosphate aldolase subunit GatY

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01303
Location and strand information: 338708 - 340672 (+)
Family: HTH_11+Mga
Protein type: TF
Protein description: Transcriptional regulator ManR

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01304
Location and strand information: 340686 - 341135 (+)
Family: 4.A.2.1.22
Protein type: TC
Protein description: PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01305
Location and strand information: 341193 - 341864 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01306
Location and strand information: 341984 - 342610 (+)
Family: NUDIX
Protein type: STP
Protein description: putative Nudix hydrolase NudL

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01307
Location and strand information: 342970 - 345813 (+)
Family: 3.A.3.1.8
Protein type: TC
Protein description: Calcium-transporting ATPase

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01308
Location and strand information: 345815 - 346480 (+)
Family: 3.A.3.1.8
Protein type: TC
Protein description: Trk system potassium uptake protein TrkA

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01309
Location and strand information: 346483 - 347154 (+)
Family: 3.A.3.1.8
Protein type: TC
Protein description: Trk system potassium uptake protein TrkA

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01310
Location and strand information: 347467 - 348438 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01311
Location and strand information: 348589 - 349530 (+)
Family: 3.A.1.5.33
Protein type: TC
Protein description: Nickel transport system permease protein NikB

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01312
Location and strand information: 349531 - 350331 (+)
Family: 3.A.1.5.43
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01313
Location and strand information: 350331 - 351122 (+)
Family: 3.A.1.5.29
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01314
Location and strand information: 351107 - 351811 (+)
Family: 3.A.1.5.15
Protein type: TC
Protein description: Nickel import ATP-binding protein NikE

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01315
Location and strand information: 351840 - 353450 (+)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel-binding periplasmic protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01316
Location and strand information: 353586 - 355325 (+)
Family: 3.A.1.21.1
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01317
Location and strand information: 355337 - 357067 (+)
Family: 3.A.1.21.1
Protein type: TC
Protein description: Lipid A export ATP-binding/permease protein MsbA

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01318
Location and strand information: 357111 - 357827 (-)
Family: Trans_reg_C
Protein type: TF
Protein description: KDP operon transcriptional regulatory protein KdpE

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01319
Location and strand information: 357820 - 360519 (-)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor protein KdpD

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01320
Location and strand information: 360691 - 362301 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01321
Location and strand information: 362332 - 364095 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01322
Location and strand information: 364355 - 365677 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01323
Location and strand information: 365770 - 366687 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01324
Location and strand information: 366700 - 367527 (+)
Family: 3.A.1.1.39
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01325
Location and strand information: 367544 - 368932 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01326
Location and strand information: 369272 - 370501 (+)
Family: null
Protein type: null
Protein description: Allantoate amidohydrolase

Gene clsuter ID: MGYG000000145_2|CGC3
Gene ID: MGYG000000145_01327
Location and strand information: 370518 - 371771 (+)
Family: 2.A.1.14.40
Protein type: TC
Protein description: Hexuronate transporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000145_01292	hypothetical protein	CAZyme	326572	328608	+	GH154
MGYG000000145_01293	Unsaturated chondroitin disaccharide hydrolase	CAZyme	328637	329812	+	GH88
MGYG000000145_01294	hypothetical protein	null	330017	330943	+	Mem_trans\| Mem_trans
MGYG000000145_01295	HTH-type transcriptional repressor PurR	TF	331000	332016	-	LacI
MGYG000000145_01296	hypothetical protein	TC	332210	333274	+	3.A.1.14.13
MGYG000000145_01297	putative siderophore transport system permease protein YfiZ	TC	333258	334304	+	3.A.1.14.22
MGYG000000145_01298	putative siderophore transport system permease protein YfhA	TC	334301	335338	+	3.A.1.14.22
MGYG000000145_01299	Ferric enterobactin transport ATP-binding protein FepC	TC	335338	336141	+	3.A.1.14.22
MGYG000000145_01300	PTS system mannose-specific EIIBCA component	TC	336313	336621	+	4.A.2.1.22
MGYG000000145_01301	PTS system fructose-specific EIIB'BC component	TC	336661	337767	+	4.A.2.1.15
MGYG000000145_01302	D-tagatose-1,6-bisphosphate aldolase subunit GatY	null	337736	338683	+	F_bP_aldolase
MGYG000000145_01303	Transcriptional regulator ManR	TF	338708	340672	+	HTH_11+Mga
MGYG000000145_01304	PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component	TC	340686	341135	+	4.A.2.1.22
MGYG000000145_01305	hypothetical protein	null	341193	341864	+	LacAB_rpiB\| DUF3666
MGYG000000145_01306	putative Nudix hydrolase NudL	STP	341984	342610	+	NUDIX
MGYG000000145_01307	Calcium-transporting ATPase	TC	342970	345813	+	3.A.3.1.8
MGYG000000145_01308	Trk system potassium uptake protein TrkA	TC	345815	346480	+	3.A.3.1.8
MGYG000000145_01309	Trk system potassium uptake protein TrkA	TC	346483	347154	+	3.A.3.1.8
MGYG000000145_01310	HTH-type transcriptional activator RhaR	TF	347467	348438	+	HTH_AraC
MGYG000000145_01311	Nickel transport system permease protein NikB	TC	348589	349530	+	3.A.1.5.33
MGYG000000145_01312	Glutathione transport system permease protein GsiD	TC	349531	350331	+	3.A.1.5.43
MGYG000000145_01313	Oligopeptide transport ATP-binding protein OppD	TC	350331	351122	+	3.A.1.5.29
MGYG000000145_01314	Nickel import ATP-binding protein NikE	TC	351107	351811	+	3.A.1.5.15
MGYG000000145_01315	Nickel-binding periplasmic protein	TC	351840	353450	+	3.A.1.5.3
MGYG000000145_01316	Putative multidrug export ATP-binding/permease protein	TC	353586	355325	+	3.A.1.21.1
MGYG000000145_01317	Lipid A export ATP-binding/permease protein MsbA	TC	355337	357067	+	3.A.1.21.1
MGYG000000145_01318	KDP operon transcriptional regulatory protein KdpE	TF	357111	357827	-	Trans_reg_C
MGYG000000145_01319	Sensor protein KdpD	TC	357820	360519	-	2.A.21.9.2
MGYG000000145_01320	HTH-type transcriptional activator RhaR	TF	360691	362301	-	HTH_AraC+HTH_AraC
MGYG000000145_01321	hypothetical protein	TC	362332	364095	-	8.A.59.2.1
MGYG000000145_01322	hypothetical protein	STP	364355	365677	+	SBP_bac_1
MGYG000000145_01323	Lactose transport system permease protein LacF	TC	365770	366687	+	3.A.1.1.11
MGYG000000145_01324	L-arabinose transport system permease protein AraQ	TC	366700	367527	+	3.A.1.1.39
MGYG000000145_01325	hypothetical protein	null	367544	368932	+	Sulfatase
MGYG000000145_01326	Allantoate amidohydrolase	null	369272	370501	+	Peptidase_M20\| M20_dimer
MGYG000000145_01327	Hexuronate transporter	TC	370518	371771	+	2.A.1.14.40
Protein ID	Protein Name	Type	Start	End	Strand	Signature