logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000158_23|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapTCnullTFCAZyme14773160151725718499197422098422226234692471125953

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000000158_01469
hypothetical protein
TC 14773 17223 - 4.A.1.1.8
MGYG000000158_01470
hypothetical protein
null 17245 17364 + No domain
MGYG000000158_01471
HTH-type transcriptional regulator TreR
TF 17448 18167 + GntR
MGYG000000158_01472
hypothetical protein
TC 18474 19790 + 3.A.1.1.45
MGYG000000158_01473
L-arabinose transport system permease protein AraP
TC 19878 20732 + 3.A.1.1.45
MGYG000000158_01474
L-arabinose transport system permease protein AraQ
TC 20732 21571 + 3.A.1.1.45
MGYG000000158_01475
Trehalose import ATP-binding protein SugC
TC 21640 22839 + 3.A.1.1.22
MGYG000000158_01476
Maltodextrin phosphorylase
CAZyme 23295 25562 - GT35
MGYG000000158_01477
4-alpha-glucanotransferase
CAZyme 25691 27196 - GH77
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 9 of 9 entries

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location

1,904 Pageviews
Mar. 16th - Apr. 16th