dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04738
Location and strand information: 82349 - 84166 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04739
Location and strand information: 84303 - 85862 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4902
Protein molecular weight: 57378.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04740
Location and strand information: 85924 - 87048 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.876
Protein molecular weight: 43115.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04741
Location and strand information: 87388 - 88788 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04742
Location and strand information: 88866 - 89795 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04743
Location and strand information: 89800 - 90657 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04744
Location and strand information: 90739 - 91728 (+)
Family: LacI
Protein type: TF
Protein description: putative HTH-type transcriptional repressor ExuR

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04745
Location and strand information: 92136 - 95570 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04746
Location and strand information: 96045 - 97064 (+)
Family: 1.A.33.1.5
Protein type: TC
Protein description: Rod shape-determining protein MreB

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04747
Location and strand information: 97086 - 99371 (+)
Family: 3.A.7.16.1
Protein type: TC
Protein description: ATP-dependent RecD-like DNA helicase

Gene clsuter ID: MGYG000000172_20|CGC1
Gene ID: MGYG000000172_04748
Location and strand information: 99393 - 100115 (+)
Family: 3.A.11.1.4
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000172_04738	hypothetical protein	TC	82349	84166	+	8.A.59.2.1
MGYG000000172_04739	hypothetical protein	CAZyme	84303	85862	+	GH28
MGYG000000172_04740	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	85924	87048	-	GH105
MGYG000000172_04741	hypothetical protein	TC	87388	88788	+	3.A.1.1.11
MGYG000000172_04742	Lactose transport system permease protein LacF	TC	88866	89795	+	3.A.1.1.11
MGYG000000172_04743	Lactose transport system permease protein LacG	TC	89800	90657	+	3.A.1.1.11
MGYG000000172_04744	putative HTH-type transcriptional repressor ExuR	TF	90739	91728	+	LacI
MGYG000000172_04745	hypothetical protein	null	92136	95570	+	Lectin_like\| Peptidase_C1\| Big_2\| Choline_bind_1\| Choline_bind_1\| Choline_bind_1
MGYG000000172_04746	Rod shape-determining protein MreB	TC	96045	97064	+	1.A.33.1.5
MGYG000000172_04747	ATP-dependent RecD-like DNA helicase	TC	97086	99371	+	3.A.7.16.1
MGYG000000172_04748	hypothetical protein	TC	99393	100115	+	3.A.11.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature