dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01585
Location and strand information: 64583 - 66370 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01586
Location and strand information: 66346 - 67875 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01587
Location and strand information: 68049 - 69746 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01588
Location and strand information: 69829 - 70767 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01589
Location and strand information: 70780 - 71211 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01590
Location and strand information: 71226 - 71714 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01591
Location and strand information: 71758 - 72705 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01592
Location and strand information: 72706 - 72831 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01593
Location and strand information: 72792 - 73994 (+)
Family: GH8
Protein type: CAZyme
Protein description: Reducing end xylose-releasing exo-oligoxylanase
Protein isoelectric point: 4.5258
Protein molecular weight: 46747.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01594
Location and strand information: 74192 - 76534 (+)
Family: CBM2|GH95|CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4753
Protein molecular weight: 88791.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01595
Location and strand information: 76574 - 78130 (+)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2735
Protein molecular weight: 59610.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01596
Location and strand information: 78127 - 80733 (+)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.1212
Protein molecular weight: 99084.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01597
Location and strand information: 80726 - 82270 (+)
Family: GH39
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.9017
Protein molecular weight: 59244.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01598
Location and strand information: 82369 - 84114 (+)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01599
Location and strand information: 84098 - 85936 (+)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000000193_13|CGC3
Gene ID: MGYG000000193_01600
Location and strand information: 86012 - 87409 (-)
Family: 2.A.25.1.9
Protein type: TC
Protein description: Amino-acid carrier protein AlsT

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000193_01593	GH8_e30\|3.2.1.8\|3.2.1.156	xylan
MGYG000000193_01594	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000000193_01595	GH43_e233\|3.2.1.55	xylan
MGYG000000193_01596	GH2_e7
MGYG000000193_01597	GH39_e1\|3.2.1.37	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000193_01585	hypothetical protein	TC	64583	66370	+	8.A.59.2.1
MGYG000000193_01586	HTH-type transcriptional activator RhaS	TF	66346	67875	+	HTH_AraC
MGYG000000193_01587	hypothetical protein	TC	68049	69746	+	3.A.1.1.29
MGYG000000193_01588	putative multiple-sugar transport system permease YteP	TC	69829	70767	+	3.A.1.1.29
MGYG000000193_01589	hypothetical protein	TC	70780	71211	+	3.A.1.1.29
MGYG000000193_01590	L-arabinose transport system permease protein AraQ	TC	71226	71714	+	3.A.1.1.29
MGYG000000193_01591	HTH-type transcriptional activator RhaR	TF	71758	72705	-	HTH_AraC
MGYG000000193_01592	hypothetical protein	null	72706	72831	+	No domain
MGYG000000193_01593	Reducing end xylose-releasing exo-oligoxylanase	CAZyme	72792	73994	+	GH8
MGYG000000193_01594	hypothetical protein	CAZyme	74192	76534	+	CBM2\| GH95\| CBM13
MGYG000000193_01595	hypothetical protein	CAZyme	76574	78130	+	GH43_10\| GH43
MGYG000000193_01596	Beta-galactosidase	CAZyme	78127	80733	+	GH2\| CBM32
MGYG000000193_01597	Beta-xylosidase	CAZyme	80726	82270	+	GH39
MGYG000000193_01598	putative ABC transporter ATP-binding protein	TC	82369	84114	+	3.A.1.135.5
MGYG000000193_01599	putative ABC transporter ATP-binding protein	TC	84098	85936	+	3.A.1.135.5
MGYG000000193_01600	Amino-acid carrier protein AlsT	TC	86012	87409	-	2.A.25.1.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature