dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01792
Location and strand information: 11913 - 12656 (-)
Family: 3.A.1.124.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01793
Location and strand information: 12659 - 12823 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01794
Location and strand information: 12820 - 13404 (-)
Family: 3.A.1.124.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01795
Location and strand information: 13405 - 14109 (-)
Family: 3.A.1.124.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YxlF

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01796
Location and strand information: 14734 - 16407 (-)
Family: GH13_31|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.8866
Protein molecular weight: 63719.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01797
Location and strand information: 16466 - 18817 (-)
Family: GH31
Protein type: CAZyme
Protein description: Oligosaccharide 4-alpha-D-glucosyltransferase
Protein isoelectric point: 4.9557
Protein molecular weight: 90040.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01798
Location and strand information: 19152 - 20870 (-)
Family: HATPase_c
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01799
Location and strand information: 20973 - 22580 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01800
Location and strand information: 22659 - 23594 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01801
Location and strand information: 23594 - 24532 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01802
Location and strand information: 24744 - 25442 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01803
Location and strand information: 25501 - 26340 (-)
Family: Response_reg
Protein type: STP
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01804
Location and strand information: 26533 - 29532 (-)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 4.7375
Protein molecular weight: 114405.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01805
Location and strand information: 29807 - 34123 (-)
Family: null
Protein type: null
Protein description: Chromosome partition protein Smc

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01806
Location and strand information: 34429 - 35469 (-)
Family: HD
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01807
Location and strand information: 35693 - 36733 (+)
Family: GH43_17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2334
Protein molecular weight: 39531.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01808
Location and strand information: 36843 - 38594 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01809
Location and strand information: 38533 - 38688 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01810
Location and strand information: 38692 - 39570 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01811
Location and strand information: 39619 - 40551 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01812
Location and strand information: 40846 - 42012 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01813
Location and strand information: 42218 - 45292 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0793
Protein molecular weight: 116228
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000193_16|CGC1
Gene ID: MGYG000000193_01814
Location and strand information: 45389 - 47389 (-)
Family: GH50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8107
Protein molecular weight: 76327.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000193_01792	hypothetical protein	TC	11913	12656	-	3.A.1.124.6
MGYG000000193_01793	hypothetical protein	null	12659	12823	-	No domain
MGYG000000193_01794	hypothetical protein	TC	12820	13404	-	3.A.1.124.2
MGYG000000193_01795	putative ABC transporter ATP-binding protein YxlF	TC	13405	14109	-	3.A.1.124.6
MGYG000000193_01796	Oligo-1,6-glucosidase	CAZyme	14734	16407	-	GH13_31\| GH13
MGYG000000193_01797	Oligosaccharide 4-alpha-D-glucosyltransferase	CAZyme	16466	18817	-	GH31
MGYG000000193_01798	hypothetical protein	STP	19152	20870	-	HATPase_c
MGYG000000193_01799	hypothetical protein	TC	20973	22580	-	3.A.1.1.9
MGYG000000193_01800	L-arabinose transport system permease protein AraQ	TC	22659	23594	-	3.A.1.1.29
MGYG000000193_01801	putative multiple-sugar transport system permease YteP	TC	23594	24532	-	3.A.1.1.10
MGYG000000193_01802	HTH-type transcriptional activator RhaR	TF	24744	25442	-	HTH_AraC
MGYG000000193_01803	Regulator of RpoS	STP	25501	26340	-	Response_reg
MGYG000000193_01804	Evolved beta-galactosidase subunit alpha	CAZyme	26533	29532	-	GH2
MGYG000000193_01805	Chromosome partition protein Smc	null	29807	34123	-	No domain
MGYG000000193_01806	hypothetical protein	STP	34429	35469	-	HD
MGYG000000193_01807	hypothetical protein	CAZyme	35693	36733	+	GH43_17
MGYG000000193_01808	hypothetical protein	null	36843	38594	-	SBP_bac_8
MGYG000000193_01809	hypothetical protein	null	38533	38688	-	No domain
MGYG000000193_01810	L-arabinose transport system permease protein AraQ	TC	38692	39570	-	3.A.1.1.29
MGYG000000193_01811	putative multiple-sugar transport system permease YteP	TC	39619	40551	-	3.A.1.1.29
MGYG000000193_01812	HTH-type transcriptional activator RhaR	TF	40846	42012	-	HTH_AraC+HTH_AraC
MGYG000000193_01813	hypothetical protein	CAZyme	42218	45292	-	GH38
MGYG000000193_01814	hypothetical protein	CAZyme	45389	47389	-	GH50
Protein ID	Protein Name	Type	Start	End	Strand	Signature