dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03122
Location and strand information: 10043 - 11956 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9192
Protein molecular weight: 73178.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03123
Location and strand information: 12240 - 12542 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03124
Location and strand information: 12797 - 13117 (+)
Family: null
Protein type: null
Protein description: N-acetyl-D-glucosamine kinase

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03125
Location and strand information: 13285 - 14727 (-)
Family: GH165
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1211
Protein molecular weight: 55471.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03126
Location and strand information: 14794 - 15711 (-)
Family: null
Protein type: null
Protein description: N-acetylneuraminate lyase

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03127
Location and strand information: 15833 - 16288 (-)
Family: null
Protein type: null
Protein description: Toxin-antitoxin biofilm protein TabA

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03128
Location and strand information: 16285 - 17298 (-)
Family: 3.A.1.5.12
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03129
Location and strand information: 17300 - 18328 (-)
Family: 3.A.1.5.12
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03130
Location and strand information: 18340 - 19233 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppC

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03131
Location and strand information: 19248 - 20210 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03132
Location and strand information: 20326 - 21885 (-)
Family: 3.A.1.5.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03133
Location and strand information: 22145 - 23002 (+)
Family: HTH_6
Protein type: TF
Protein description: putative HTH-type transcriptional regulator YbbH

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03134
Location and strand information: 23184 - 23885 (-)
Family: null
Protein type: null
Protein description: Putative N-acetylmannosamine-6-phosphate 2-epimerase

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03135
Location and strand information: 24062 - 25165 (-)
Family: CE9
Protein type: CAZyme
Protein description: N-acetylglucosamine-6-phosphate deacetylase
Protein isoelectric point: 4.6187
Protein molecular weight: 39757.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03136
Location and strand information: 25209 - 25952 (-)
Family: null
Protein type: null
Protein description: Glucosamine-6-phosphate deaminase 1

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03137
Location and strand information: 26356 - 27183 (+)
Family: HTH_6
Protein type: TF
Protein description: HTH-type transcriptional regulator MurR

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03138
Location and strand information: 27461 - 28984 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1803
Protein molecular weight: 57651.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03139
Location and strand information: 29223 - 30032 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03140
Location and strand information: 30034 - 30933 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000000213_43|CGC1
Gene ID: MGYG000000213_03141
Location and strand information: 31199 - 32593 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: putative arabinose-binding protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000213_03122	hypothetical protein	CAZyme	10043	11956	-	GH20
MGYG000000213_03123	hypothetical protein	null	12240	12542	+	No domain
MGYG000000213_03124	N-acetyl-D-glucosamine kinase	null	12797	13117	+	ROK
MGYG000000213_03125	hypothetical protein	CAZyme	13285	14727	-	GH165
MGYG000000213_03126	N-acetylneuraminate lyase	null	14794	15711	-	DHDPS
MGYG000000213_03127	Toxin-antitoxin biofilm protein TabA	null	15833	16288	-	DUF386
MGYG000000213_03128	Oligopeptide transport ATP-binding protein OppF	TC	16285	17298	-	3.A.1.5.12
MGYG000000213_03129	Oligopeptide transport ATP-binding protein OppD	TC	17300	18328	-	3.A.1.5.12
MGYG000000213_03130	Oligopeptide transport system permease protein OppC	TC	18340	19233	-	3.A.1.5.20
MGYG000000213_03131	Glutathione transport system permease protein GsiC	TC	19248	20210	-	3.A.1.5.20
MGYG000000213_03132	hypothetical protein	TC	20326	21885	-	3.A.1.5.11
MGYG000000213_03133	putative HTH-type transcriptional regulator YbbH	TF	22145	23002	+	HTH_6
MGYG000000213_03134	Putative N-acetylmannosamine-6-phosphate 2-epimerase	null	23184	23885	-	NanE
MGYG000000213_03135	N-acetylglucosamine-6-phosphate deacetylase	CAZyme	24062	25165	-	CE9
MGYG000000213_03136	Glucosamine-6-phosphate deaminase 1	null	25209	25952	-	Glucosamine_iso
MGYG000000213_03137	HTH-type transcriptional regulator MurR	TF	26356	27183	+	HTH_6
MGYG000000213_03138	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	27461	28984	-	GH51
MGYG000000213_03139	L-arabinose transport system permease protein AraQ	TC	29223	30032	-	3.A.1.1.34
MGYG000000213_03140	L-arabinose transport system permease protein AraP	TC	30034	30933	-	3.A.1.1.34
MGYG000000213_03141	putative arabinose-binding protein	TC	31199	32593	-	3.A.1.1.34
Protein ID	Protein Name	Type	Start	End	Strand	Signature