dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00070
Location and strand information: 85581 - 86225 (+)
Family: 3.A.1.12.5
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00071
Location and strand information: 86249 - 87457 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00072
Location and strand information: 87730 - 89124 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8161
Protein molecular weight: 52373.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00073
Location and strand information: 89138 - 91891 (-)
Family: PL40
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6405
Protein molecular weight: 102756.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00074
Location and strand information: 91984 - 96069 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00075
Location and strand information: 96513 - 99578 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00076
Location and strand information: 99594 - 101543 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00077
Location and strand information: 101641 - 104100 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3393
Protein molecular weight: 94227.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00078
Location and strand information: 104109 - 106118 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.3147
Protein molecular weight: 76156.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00079
Location and strand information: 106270 - 107379 (-)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.2458
Protein molecular weight: 41861.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00080
Location and strand information: 107434 - 109308 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00081
Location and strand information: 109498 - 109620 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00082
Location and strand information: 109669 - 111459 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3943
Protein molecular weight: 67888.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00083
Location and strand information: 111518 - 113152 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00084
Location and strand information: 113196 - 114692 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00085
Location and strand information: 114717 - 117482 (+)
Family: GH10|GH43_12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9655
Protein molecular weight: 103317.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00086
Location and strand information: 117531 - 118502 (+)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.8267
Protein molecular weight: 37048.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00087
Location and strand information: 118515 - 120518 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 7.3408
Protein molecular weight: 76695.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00088
Location and strand information: 120543 - 120656 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00089
Location and strand information: 120678 - 122537 (-)
Family: 2.A.47.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00090
Location and strand information: 122689 - 126780 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00091
Location and strand information: 126859 - 129438 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2695
Protein molecular weight: 98920.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00092
Location and strand information: 129451 - 131040 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8981
Protein molecular weight: 60438.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00093
Location and strand information: 131067 - 134318 (-)
Family: CBM2|CBM13|CE6|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8693
Protein molecular weight: 121023.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00094
Location and strand information: 134343 - 136787 (-)
Family: GH8|CE15
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5085
Protein molecular weight: 92388.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00095
Location and strand information: 136830 - 138779 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.6456
Protein molecular weight: 71928.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00096
Location and strand information: 139022 - 142132 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00097
Location and strand information: 142242 - 143612 (+)
Family: CBM6|GH43|CBM42|GH43_29
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 6.3854
Protein molecular weight: 52387.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00098
Location and strand information: 143639 - 146092 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0907
Protein molecular weight: 93382.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00099
Location and strand information: 146198 - 148798 (-)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.119
Protein molecular weight: 96649.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00100
Location and strand information: 148824 - 151214 (-)
Family: GH43|GH43_10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.118
Protein molecular weight: 88479.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00101
Location and strand information: 151259 - 152407 (-)
Family: CE1|CE0|CBM48
Protein type: CAZyme
Protein description: Carbohydrate acetyl esterase/feruloyl esterase
Protein isoelectric point: 7.1159
Protein molecular weight: 43444.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00102
Location and strand information: 152995 - 153237 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00103
Location and strand information: 153264 - 154907 (-)
Family: CBM35|GH30|GH30_8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7231
Protein molecular weight: 61699.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00104
Location and strand information: 154911 - 157127 (-)
Family: GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4369
Protein molecular weight: 80469.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00105
Location and strand information: 157158 - 158240 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00106
Location and strand information: 158231 - 159985 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00107
Location and strand information: 160006 - 162825 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00108
Location and strand information: 162855 - 164726 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00109
Location and strand information: 164738 - 167887 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000224_1|CGC2
Gene ID: MGYG000000224_00110
Location and strand information: 168155 - 169888 (-)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 5.284
Protein molecular weight: 64778.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000224_00070	Vitamin B12 import ATP-binding protein BtuD	TC	85581	86225	+	3.A.1.12.5
MGYG000000224_00071	hypothetical protein	null	86249	87457	+	No domain
MGYG000000224_00072	hypothetical protein	CAZyme	87730	89124	-	GH28
MGYG000000224_00073	hypothetical protein	CAZyme	89138	91891	-	PL40
MGYG000000224_00074	Sensor histidine kinase RcsC	TF	91984	96069	-	HTH_AraC
MGYG000000224_00075	hypothetical protein	TC	96513	99578	+	1.B.14.6.1
MGYG000000224_00076	hypothetical protein	null	99594	101543	+	SusD-like_3\| SusD_RagB
MGYG000000224_00077	hypothetical protein	CAZyme	101641	104100	+	GH115
MGYG000000224_00078	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	104109	106118	+	GH67
MGYG000000224_00079	Endo-1,4-beta-xylanase A	CAZyme	106270	107379	-	GH10
MGYG000000224_00080	hypothetical protein	null	107434	109308	-	Glyco_hydro_2_N\| SASA
MGYG000000224_00081	hypothetical protein	null	109498	109620	+	No domain
MGYG000000224_00082	hypothetical protein	CAZyme	109669	111459	+	GH35
MGYG000000224_00083	hypothetical protein	null	111518	113152	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000000224_00084	Inner membrane symporter YicJ	TC	113196	114692	+	2.A.2.3.4
MGYG000000224_00085	hypothetical protein	CAZyme	114717	117482	+	GH10\| GH43_12
MGYG000000224_00086	Xylosidase/arabinosidase	CAZyme	117531	118502	+	GH43\| GH43_1
MGYG000000224_00087	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	118515	120518	+	GH67
MGYG000000224_00088	hypothetical protein	null	120543	120656	+	No domain
MGYG000000224_00089	hypothetical protein	TC	120678	122537	-	2.A.47.4.8
MGYG000000224_00090	Sensor histidine kinase RcsC	TF	122689	126780	+	HTH_AraC
MGYG000000224_00091	hypothetical protein	CAZyme	126859	129438	-	GH115
MGYG000000224_00092	hypothetical protein	CAZyme	129451	131040	-	GH43\| GH43_10
MGYG000000224_00093	hypothetical protein	CAZyme	131067	134318	-	CBM2\| CBM13\| CE6\| GH95
MGYG000000224_00094	hypothetical protein	CAZyme	134343	136787	-	GH8\| CE15
MGYG000000224_00095	Retaining alpha-galactosidase	CAZyme	136830	138779	-	GH97
MGYG000000224_00096	HTH-type transcriptional activator RhaR	TF	139022	142132	+	HTH_AraC
MGYG000000224_00097	Arabinoxylan arabinofuranohydrolase	CAZyme	142242	143612	+	CBM6\| GH43\| CBM42\| GH43_29
MGYG000000224_00098	hypothetical protein	CAZyme	143639	146092	+	GH31
MGYG000000224_00099	Beta-galactosidase	CAZyme	146198	148798	-	CBM32\| GH2
MGYG000000224_00100	hypothetical protein	CAZyme	148824	151214	-	GH43\| GH43_10\| CBM22
MGYG000000224_00101	Carbohydrate acetyl esterase/feruloyl esterase	CAZyme	151259	152407	-	CE1\| CE0\| CBM48
MGYG000000224_00102	hypothetical protein	null	152995	153237	+	No domain
MGYG000000224_00103	hypothetical protein	CAZyme	153264	154907	-	CBM35\| GH30\| GH30_8
MGYG000000224_00104	hypothetical protein	CAZyme	154911	157127	-	GH10
MGYG000000224_00105	hypothetical protein	null	157158	158240	-	DUF1735\| DUF5627
MGYG000000224_00106	hypothetical protein	null	158231	159985	-	SusD-like_3\| SusD_RagB
MGYG000000224_00107	hypothetical protein	TC	160006	162825	-	1.B.14.6.1
MGYG000000224_00108	hypothetical protein	null	162855	164726	-	SusD-like_3\| SusD_RagB
MGYG000000224_00109	hypothetical protein	TC	164738	167887	-	1.B.14.6.1
MGYG000000224_00110	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	168155	169888	-	GH43\| GH43_12
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000224_00072	GH28_e66
MGYG000000224_00073
MGYG000000224_00077	GH115_e2\|3.2.1.131	xylan
MGYG000000224_00078	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000000224_00079	GH10_e61
MGYG000000224_00082	GH35_e24
MGYG000000224_00085	GH10_e61
MGYG000000224_00086	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000000224_00087	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000000224_00091	GH115_e2\|3.2.1.131	xylan
MGYG000000224_00092	GH43_e221\|3.2.1.55	xylan
MGYG000000224_00093	GH95_e0\|CE6_e7\|CBM2_e92\|CBM13_e181\|3.2.1.-\|3.1.1.72	xylan\|pectin
MGYG000000224_00094	GH8_e33\|3.2.1.156	xylan
MGYG000000224_00095	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000000224_00097	GH43_e137\|CBM42_e14\|3.2.1.8	xylan
MGYG000000224_00098	GH31_e48
MGYG000000224_00099	GH2_e7
MGYG000000224_00100	GH43_e171\|CBM22_e18
MGYG000000224_00101	CE1_e78
MGYG000000224_00103	GH30_e45\|CBM35_e27\|3.2.1.8\|3.2.1.136	xylan
MGYG000000224_00104	GH10_e72\|3.2.1.8	xylan
MGYG000000224_00110	GH43_e50\|3.2.1.55	xylan