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CAZyme Gene Cluster: MGYG000000224_6|CGC1

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000224_01843
hypothetical protein
CAZyme 37051 38343 - PL1_2| PL1
MGYG000000224_01844
hypothetical protein
TC 38427 40349 - 8.A.46.1.3
MGYG000000224_01845
hypothetical protein
TC 40365 43613 - 1.B.14.6.1
MGYG000000224_01846
HTH-type transcriptional activator RhaS
TF 44171 45091 - HTH_AraC+HTH_AraC
MGYG000000224_01847
hypothetical protein
CAZyme 45236 46558 - GH105
MGYG000000224_01848
Lactaldehyde reductase
null 46578 47723 - Fe-ADH
MGYG000000224_01849
Rhamnulose-1-phosphate aldolase
null 47748 48557 - Aldolase_II
MGYG000000224_01850
L-rhamnose-proton symporter
TC 48591 49622 - 2.A.7.6.1
MGYG000000224_01851
L-rhamnose isomerase
null 49714 50967 - RhaA
MGYG000000224_01852
L-Rhamnulokinase
null 50994 52460 - FGGY_N| FGGY_C
MGYG000000224_01853
hypothetical protein
CAZyme 52592 54112 - GH28
MGYG000000224_01854
Rhamnogalacturonan endolyase YesW
CAZyme 54171 56006 - PL11
MGYG000000224_01855
hypothetical protein
CAZyme 56003 58792 - GH106
MGYG000000224_01856
hypothetical protein
CAZyme 58800 61322 - GH105
MGYG000000224_01857
Beta-galactosidase
CAZyme 61518 65393 + GH43_19| GH2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000000224_01843 PL1_e64|4.2.2.2 pectin
MGYG000000224_01847 GH105_e39
MGYG000000224_01853 GH28_e61
MGYG000000224_01854 PL11_e1
MGYG000000224_01855 GH106_e0|3.2.1.174 pectin
MGYG000000224_01856 GH105_e12
MGYG000000224_01857 GH2_e89|3.2.1.23 beta-galactan

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location