dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00128
Location and strand information: 135789 - 136733 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00129
Location and strand information: 136733 - 137590 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00130
Location and strand information: 137592 - 138725 (+)
Family: GH8
Protein type: CAZyme
Protein description: Reducing end xylose-releasing exo-oligoxylanase
Protein isoelectric point: 4.7232
Protein molecular weight: 44061.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00131
Location and strand information: 138738 - 139364 (+)
Family: CE4
Protein type: CAZyme
Protein description: Peptidoglycan-N-acetylglucosamine deacetylase
Protein isoelectric point: 4.4315
Protein molecular weight: 23993.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00132
Location and strand information: 139393 - 141387 (+)
Family: GH67
Protein type: CAZyme
Protein description: Xylan alpha-(1->2)-glucuronosidase
Protein isoelectric point: 4.639
Protein molecular weight: 75981.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00133
Location and strand information: 141592 - 143340 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00134
Location and strand information: 143367 - 143774 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000226_1|CGC4
Gene ID: MGYG000000226_00135
Location and strand information: 144030 - 145577 (+)
Family: 3.A.1.15.3
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000226_00130	GH8_e30\|3.2.1.8\|3.2.1.156	xylan
MGYG000000226_00131	CE4_e10
MGYG000000226_00132	GH67_e1\|3.2.1.139\|3.2.1.131	xylan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000226_00128	Lactose transport system permease protein LacF	TC	135789	136733	+	3.A.1.1.4
MGYG000000226_00129	L-arabinose transport system permease protein AraQ	TC	136733	137590	+	3.A.1.1.36
MGYG000000226_00130	Reducing end xylose-releasing exo-oligoxylanase	CAZyme	137592	138725	+	GH8
MGYG000000226_00131	Peptidoglycan-N-acetylglucosamine deacetylase	CAZyme	138738	139364	+	CE4
MGYG000000226_00132	Xylan alpha-(1->2)-glucuronosidase	CAZyme	139393	141387	+	GH67
MGYG000000226_00133	hypothetical protein	null	141592	143340	+	Metallophos
MGYG000000226_00134	hypothetical protein	null	143367	143774	+	No domain
MGYG000000226_00135	hypothetical protein	TC	144030	145577	+	3.A.1.15.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature