dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00075
Location and strand information: 83905 - 85863 (+)
Family: GH67
Protein type: CAZyme
Protein description: Xylan alpha-(1->2)-glucuronosidase
Protein isoelectric point: 4.9592
Protein molecular weight: 75388.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00076
Location and strand information: 86003 - 87328 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00077
Location and strand information: 87420 - 88304 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00078
Location and strand information: 88305 - 89180 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00079
Location and strand information: 89190 - 89906 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00080
Location and strand information: 89937 - 91571 (+)
Family: GH43_11|GH43
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.7266
Protein molecular weight: 62065.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00081
Location and strand information: 92184 - 93176 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00082
Location and strand information: 93192 - 94076 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00083
Location and strand information: 94125 - 95732 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000238_1|CGC1
Gene ID: MGYG000000238_00084
Location and strand information: 95733 - 97217 (+)
Family: GH32
Protein type: CAZyme
Protein description: Sucrose-6-phosphate hydrolase
Protein isoelectric point: 4.9781
Protein molecular weight: 56546.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000238_00075	GH67_e1\|3.2.1.139\|3.2.1.131	xylan
MGYG000000238_00080	GH43_e0\|3.2.1.55\|3.2.1.37\|3.2.1.-	xylan
MGYG000000238_00084	GH32_e32

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000238_00075	Xylan alpha-(1->2)-glucuronosidase	CAZyme	83905	85863	+	GH67
MGYG000000238_00076	Putative ABC transporter substrate-binding protein YesO	STP	86003	87328	+	SBP_bac_1
MGYG000000238_00077	Lactose transport system permease protein LacF	TC	87420	88304	+	3.A.1.1.11
MGYG000000238_00078	L-arabinose transport system permease protein AraQ	TC	88305	89180	+	3.A.1.1.11
MGYG000000238_00079	hypothetical protein	null	89190	89906	+	No domain
MGYG000000238_00080	Beta-xylosidase	CAZyme	89937	91571	+	GH43_11\| GH43
MGYG000000238_00081	putative multiple-sugar transport system permease YteP	TC	92184	93176	+	3.A.1.1.10
MGYG000000238_00082	Inner membrane ABC transporter permease protein YcjP	TC	93192	94076	+	3.A.1.1.10
MGYG000000238_00083	hypothetical protein	STP	94125	95732	+	SBP_bac_1
MGYG000000238_00084	Sucrose-6-phosphate hydrolase	CAZyme	95733	97217	+	GH32
Protein ID	Protein Name	Type	Start	End	Strand	Signature