dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00114
Location and strand information: 124449 - 125414 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00115
Location and strand information: 125430 - 126272 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00116
Location and strand information: 126287 - 126973 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.5954
Protein molecular weight: 25971.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00117
Location and strand information: 127031 - 128611 (+)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7926
Protein molecular weight: 59390.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00118
Location and strand information: 128615 - 130507 (+)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3364
Protein molecular weight: 71388.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00119
Location and strand information: 130540 - 131178 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00120
Location and strand information: 131193 - 132749 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1038
Protein molecular weight: 57614.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00121
Location and strand information: 132769 - 133611 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00122
Location and strand information: 133716 - 134978 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000245_1|CGC4
Gene ID: MGYG000000245_00123
Location and strand information: 135166 - 140727 (+)
Family: CBM4|GH16|GH16_3|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9
Protein molecular weight: 204051.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000245_00114	putative multiple-sugar transport system permease YteP	TC	124449	125414	+	3.A.1.1.10
MGYG000000245_00115	L-arabinose transport system permease protein AraQ	TC	125430	126272	+	3.A.1.1.29
MGYG000000245_00116	Rhamnogalacturonan acetylesterase RhgT	CAZyme	126287	126973	+	CE12
MGYG000000245_00117	hypothetical protein	CAZyme	127031	128611	+	GH43\| GH43_10
MGYG000000245_00118	hypothetical protein	CAZyme	128615	130507	+	GH43_12\| GH43
MGYG000000245_00119	hypothetical protein	null	130540	131178	+	No domain
MGYG000000245_00120	hypothetical protein	CAZyme	131193	132749	+	GH28
MGYG000000245_00121	hypothetical protein	null	132769	133611	+	AP_endonuc_2
MGYG000000245_00122	hypothetical protein	null	133716	134978	+	No domain
MGYG000000245_00123	hypothetical protein	CAZyme	135166	140727	+	CBM4\| GH16\| GH16_3\| CBM32
Protein ID	Protein Name	Type	Start	End	Strand	Signature