dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00549
Location and strand information: 4301 - 5854 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1144
Protein molecular weight: 58690.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00550
Location and strand information: 6008 - 6859 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00551
Location and strand information: 6866 - 7768 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00552
Location and strand information: 7950 - 8282 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00553
Location and strand information: 8402 - 9781 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00554
Location and strand information: 10111 - 11238 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.6044
Protein molecular weight: 43626.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00555
Location and strand information: 11478 - 11639 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00556
Location and strand information: 11763 - 12959 (-)
Family: null
Protein type: null
Protein description: Altronate oxidoreductase

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00557
Location and strand information: 13246 - 14574 (-)
Family: 2.A.66.1.23
Protein type: TC
Protein description: putative FMN/FAD exporter YeeO

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00558
Location and strand information: 14581 - 15393 (-)
Family: null
Protein type: null
Protein description: 5-keto-L-gluconate epimerase

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00559
Location and strand information: 15395 - 16981 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6645
Protein molecular weight: 59276.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00560
Location and strand information: 16996 - 17844 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00561
Location and strand information: 17850 - 18776 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00562
Location and strand information: 18797 - 19927 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.5902
Protein molecular weight: 44951.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00563
Location and strand information: 20020 - 21393 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00564
Location and strand information: 21435 - 22163 (-)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00565
Location and strand information: 22174 - 23448 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000278_3|CGC1
Gene ID: MGYG000000278_00566
Location and strand information: 23680 - 25650 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000278_00549	hypothetical protein	CAZyme	4301	5854	-	GH28
MGYG000000278_00550	Lactose transport system permease protein LacG	TC	6008	6859	-	3.A.1.1.11
MGYG000000278_00551	Lactose transport system permease protein LacF	TC	6866	7768	-	3.A.1.1.11
MGYG000000278_00552	hypothetical protein	null	7950	8282	-	No domain
MGYG000000278_00553	hypothetical protein	TC	8402	9781	-	3.A.1.1.11
MGYG000000278_00554	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	10111	11238	+	GH105
MGYG000000278_00555	hypothetical protein	null	11478	11639	-	No domain
MGYG000000278_00556	Altronate oxidoreductase	null	11763	12959	-	Mannitol_dh\| Mannitol_dh_C
MGYG000000278_00557	putative FMN/FAD exporter YeeO	TC	13246	14574	-	2.A.66.1.23
MGYG000000278_00558	5-keto-L-gluconate epimerase	null	14581	15393	-	AP_endonuc_2
MGYG000000278_00559	hypothetical protein	CAZyme	15395	16981	-	GH28
MGYG000000278_00560	Inner membrane ABC transporter permease protein YcjP	TC	16996	17844	-	3.A.1.1.11
MGYG000000278_00561	Lactose transport system permease protein LacF	TC	17850	18776	-	3.A.1.1.11
MGYG000000278_00562	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	18797	19927	-	GH105
MGYG000000278_00563	hypothetical protein	TC	20020	21393	-	3.A.1.1.11
MGYG000000278_00564	hypothetical protein	STP	21435	22163	-	AraC_binding
MGYG000000278_00565	hypothetical protein	STP	22174	23448	-	SBP_bac_1
MGYG000000278_00566	hypothetical protein	TC	23680	25650	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature