logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000289_7|CGC2

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000289_00812
TonB-dependent receptor SusC
TC 73130 76297 + 1.B.14.6.1
MGYG000000289_00813
hypothetical protein
null 76317 78332 + SusD-like_3| SusD_RagB
MGYG000000289_00814
TonB-dependent receptor SusC
TC 78402 81398 + 1.B.14.6.2
MGYG000000289_00815
hypothetical protein
null 81424 83181 + SusD-like_3| SusD_RagB
MGYG000000289_00816
Pectate lyase L
CAZyme 83259 84704 - PL9_1| PL9
MGYG000000289_00817
Rhamnogalacturonan endolyase YesW
CAZyme 84767 86611 - PL11_1| CBM2| CBM13| PL11| CBM35
MGYG000000289_00818
hypothetical protein
CAZyme 87415 89031 + CE12
MGYG000000289_00819
L-rhamnose mutarotase
null 89058 89375 + rhaM
MGYG000000289_00820
hypothetical protein
CAZyme 89416 90651 + CE12
MGYG000000289_00821
Beta-galactosidase BoGH2A
CAZyme 90664 93036 + GH2
MGYG000000289_00822
hypothetical protein
CAZyme 93105 95558 + GH106
MGYG000000289_00823
hypothetical protein
CAZyme 95555 96676 + GH105
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000000289_00816 PL9_e26|4.2.2.23 pectin
MGYG000000289_00817 PL11_e0|CBM35_e56|CBM2_e72|CBM13_e93|4.2.2.23 pectin
MGYG000000289_00818 CE12_e40
MGYG000000289_00820 CE12_e46
MGYG000000289_00821 GH2_e122
MGYG000000289_00822 GH106_e0|3.2.1.174 pectin
MGYG000000289_00823 GH105_e14|3.2.1.172 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location