dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01173
Location and strand information: 190 - 1194 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 5.3159
Protein molecular weight: 38970.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01174
Location and strand information: 1203 - 2285 (-)
Family: GT4
Protein type: CAZyme
Protein description: GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase
Protein isoelectric point: 6.3058
Protein molecular weight: 41294.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01175
Location and strand information: 2293 - 3129 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01176
Location and strand information: 3212 - 4435 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01177
Location and strand information: 4456 - 5250 (-)
Family: GT111
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9021
Protein molecular weight: 31313.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01178
Location and strand information: 5546 - 6181 (-)
Family: 9.B.18.1.2
Protein type: TC
Protein description: putative sugar transferase EpsL

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01179
Location and strand information: 6223 - 6924 (-)
Family: 8.A.3.2.2
Protein type: TC
Protein description: Tyrosine-protein kinase CpsD

Gene clsuter ID: MGYG000000298_72|CGC1
Gene ID: MGYG000000298_01180
Location and strand information: 6935 - 7627 (-)
Family: 8.A.3.2.3
Protein type: TC
Protein description: putative capsular polysaccharide biosynthesis protein YwqC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000298_01173	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	190	1194	-	GT2
MGYG000000298_01174	GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase	CAZyme	1203	2285	-	GT4
MGYG000000298_01175	hypothetical protein	null	2293	3129	-	LicD
MGYG000000298_01176	hypothetical protein	null	3212	4435	-	No domain
MGYG000000298_01177	hypothetical protein	CAZyme	4456	5250	-	GT111
MGYG000000298_01178	putative sugar transferase EpsL	TC	5546	6181	-	9.B.18.1.2
MGYG000000298_01179	Tyrosine-protein kinase CpsD	TC	6223	6924	-	8.A.3.2.2
MGYG000000298_01180	putative capsular polysaccharide biosynthesis protein YwqC	TC	6935	7627	-	8.A.3.2.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature