dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01930
Location and strand information: 193875 - 197174 (-)
Family: GH148
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.9055
Protein molecular weight: 121163.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01932
Location and strand information: 198480 - 199223 (+)
Family: TrmB
Protein type: TF
Protein description: Transcriptional regulator KdgR

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01933
Location and strand information: 199267 - 200589 (+)
Family: null
Protein type: null
Protein description: D-galactonate dehydratase

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01934
Location and strand information: 200617 - 201948 (+)
Family: GH10
Protein type: CAZyme
Protein description: Anti-sigma-I factor RsgI6
Protein isoelectric point: 5.6992
Protein molecular weight: 52166.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01935
Location and strand information: 201957 - 202994 (+)
Family: null
Protein type: null
Protein description: Penicillin-binding protein 4*

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01936
Location and strand information: 203023 - 203778 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01937
Location and strand information: 203793 - 205262 (+)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase C
Protein isoelectric point: 6.3233
Protein molecular weight: 55801.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01938
Location and strand information: 205277 - 206032 (+)
Family: null
Protein type: null
Protein description: 3-oxoacyl-[acyl-carrier-protein] reductase FabG

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01939
Location and strand information: 206154 - 207320 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000360_4|CGC3
Gene ID: MGYG000000360_01940
Location and strand information: 207409 - 208146 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000360_01930	hypothetical protein	CAZyme	193875	197174	-	GH148
MGYG000000360_01932	Transcriptional regulator KdgR	TF	198480	199223	+	TrmB
MGYG000000360_01933	D-galactonate dehydratase	null	199267	200589	+	MR_MLE_N\| MR_MLE_C
MGYG000000360_01934	Anti-sigma-I factor RsgI6	CAZyme	200617	201948	+	GH10
MGYG000000360_01935	Penicillin-binding protein 4*	null	201957	202994	+	Beta-lactamase
MGYG000000360_01936	hypothetical protein	null	203023	203778	+	RraA-like
MGYG000000360_01937	Endo-1,4-beta-xylanase C	CAZyme	203793	205262	+	GH10
MGYG000000360_01938	3-oxoacyl-[acyl-carrier-protein] reductase FabG	null	205277	206032	+	adh_short_C2
MGYG000000360_01939	hypothetical protein	null	206154	207320	+	Peptidase_M50\| Trypsin_2\| PDZ_2
MGYG000000360_01940	Lipopolysaccharide export system ATP-binding protein LptB	TC	207409	208146	-	1.B.42.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature