logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000398_10|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapTCnullCAZymeTF8777090775937819678799793102799105805108811111817114823

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000000398_01648
hypothetical protein
TC 87770 89542 + 1.B.52.2.1
MGYG000000398_01649
hypothetical protein
null 89577 90020 + Acetyltransf_10
MGYG000000398_01650
hypothetical protein
null 90129 90305 - DUF4250
MGYG000000398_01651
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
CAZyme 90334 91410 - GT28
MGYG000000398_01652
Trk system potassium uptake protein TrkG
TC 91845 93317 - 2.A.38.1.1
MGYG000000398_01653
Trk system potassium uptake protein TrkA
TC 93331 94719 - 2.A.38.1.1
MGYG000000398_01654
hypothetical protein
TF 94905 95225 + HTH_DeoR
MGYG000000398_01655
Thermostable beta-glucosidase B
CAZyme 95282 97618 - GH3
MGYG000000398_01656
DNA-directed RNA polymerase subunit beta
null 97832 101725 + RNA_pol_Rpb2_1| RNA_pol_Rpb2_2| RNA_pol_Rpb2_2| RNA_pol_Rpb2_3| RNA_pol_Rpb2_45| RNA_pol_Rpb2_6| RNA_pol_Rpb2_7
MGYG000000398_01657
DNA-directed RNA polymerase subunit beta'
null 101776 105528 + RNA_pol_Rpb1_1| RNA_pol_Rpb1_2| RNA_pol_Rpb1_3| RNA_pol_Rpb1_4| RNA_pol_Rpb1_5
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 10 of 15 entries

Substrate predicted by dbCAN-PUL is xyloglucan download this fig


Genomic location

1,904 Pageviews
Mar. 16th - Apr. 16th