dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00099
Location and strand information: 122051 - 123157 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 6.7138
Protein molecular weight: 40275.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00100
Location and strand information: 123487 - 125061 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8873
Protein molecular weight: 58733.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00101
Location and strand information: 125137 - 126510 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00102
Location and strand information: 126673 - 127581 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00103
Location and strand information: 127584 - 128441 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00104
Location and strand information: 128445 - 129611 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.8351
Protein molecular weight: 44397.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00105
Location and strand information: 129764 - 130723 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00106
Location and strand information: 130720 - 131577 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000539_1|CGC1
Gene ID: MGYG000000539_00107
Location and strand information: 131745 - 133067 (+)
Family: 9.A.40.2.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000539_00099	Pectinesterase A	CAZyme	122051	123157	-	CE8
MGYG000000539_00100	hypothetical protein	CAZyme	123487	125061	+	GH28
MGYG000000539_00101	hypothetical protein	TC	125137	126510	+	3.A.1.1.11
MGYG000000539_00102	Lactose transport system permease protein LacF	TC	126673	127581	+	3.A.1.1.11
MGYG000000539_00103	Lactose transport system permease protein LacG	TC	127584	128441	+	3.A.1.1.11
MGYG000000539_00104	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	128445	129611	+	GH105
MGYG000000539_00105	HTH-type transcriptional activator RhaR	TF	129764	130723	+	HTH_AraC+HTH_AraC
MGYG000000539_00106	hypothetical protein	null	130720	131577	+	AP_endonuc_2
MGYG000000539_00107	hypothetical protein	TC	131745	133067	+	9.A.40.2.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature