dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00581
Location and strand information: 13992 - 15188 (-)
Family: 2.A.1.15.18
Protein type: TC
Protein description: Protein TsgA

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00582
Location and strand information: 15210 - 16214 (-)
Family: 2.A.56.1.9
Protein type: TC
Protein description: Solute-binding protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00583
Location and strand information: 16211 - 16981 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00584
Location and strand information: 17000 - 18481 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00585
Location and strand information: 18584 - 19063 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00586
Location and strand information: 19217 - 20509 (-)
Family: 2.A.56.1.5
Protein type: TC
Protein description: Sialic acid TRAP transporter permease protein SiaT

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00587
Location and strand information: 20509 - 21033 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00588
Location and strand information: 21223 - 22302 (-)
Family: 2.A.56.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00589
Location and strand information: 22472 - 22735 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00590
Location and strand information: 22743 - 24251 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.0383
Protein molecular weight: 57331.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00591
Location and strand information: 24396 - 25706 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8211
Protein molecular weight: 49732.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00592
Location and strand information: 25895 - 28045 (-)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 5.0787
Protein molecular weight: 81442.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00593
Location and strand information: 28140 - 29552 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1701
Protein molecular weight: 53722.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00594
Location and strand information: 29553 - 30605 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.8338
Protein molecular weight: 39494.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00595
Location and strand information: 30818 - 32539 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00596
Location and strand information: 32678 - 33607 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00597
Location and strand information: 33620 - 34573 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00598
Location and strand information: 35022 - 36020 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00599
Location and strand information: 36038 - 37372 (-)
Family: 2.A.66.1.33
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00600
Location and strand information: 37423 - 39447 (-)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0074
Protein molecular weight: 76634.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00601
Location and strand information: 39602 - 43051 (-)
Family: TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_10|CGC1
Gene ID: MGYG000000621_00602
Location and strand information: 43091 - 45925 (-)
Family: GH2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9404
Protein molecular weight: 106289.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000621_00590	GH51_e14\|3.2.1.55	arabinan
MGYG000000621_00591	GH28_e95\|3.2.1.-	pectin
MGYG000000621_00592	GH112_e1\|2.4.1.247	humanmilkpolysaccharide
MGYG000000621_00593	CE12_e8
MGYG000000621_00594	GH105_e37
MGYG000000621_00600	GH35_e6\|3.2.1.23	pectin
MGYG000000621_00602	GH2_e71\|3.2.1.55	arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan|pectin

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000621_00581	Protein TsgA	TC	13992	15188	-	2.A.1.15.18
MGYG000000621_00582	Solute-binding protein	TC	15210	16214	-	2.A.56.1.9
MGYG000000621_00583	putative response regulatory protein	TF	16211	16981	-	HTH_AraC+HTH_AraC
MGYG000000621_00584	hypothetical protein	TC	17000	18481	-	8.A.59.2.1
MGYG000000621_00585	hypothetical protein	null	18584	19063	-	YcxB
MGYG000000621_00586	Sialic acid TRAP transporter permease protein SiaT	TC	19217	20509	-	2.A.56.1.5
MGYG000000621_00587	hypothetical protein	null	20509	21033	-	DctQ
MGYG000000621_00588	hypothetical protein	TC	21223	22302	-	2.A.56.1.1
MGYG000000621_00589	hypothetical protein	null	22472	22735	-	DUF6171
MGYG000000621_00590	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	22743	24251	-	GH51
MGYG000000621_00591	hypothetical protein	CAZyme	24396	25706	-	GH28
MGYG000000621_00592	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	25895	28045	-	GH112
MGYG000000621_00593	hypothetical protein	CAZyme	28140	29552	-	CE12
MGYG000000621_00594	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	29553	30605	-	GH105
MGYG000000621_00595	hypothetical protein	null	30818	32539	-	No domain
MGYG000000621_00596	hypothetical protein	TC	32678	33607	-	3.A.1.1.29
MGYG000000621_00597	putative multiple-sugar transport system permease YteP	TC	33620	34573	-	3.A.1.1.29
MGYG000000621_00598	HTH-type transcriptional activator RhaS	TF	35022	36020	+	HTH_AraC+HTH_AraC
MGYG000000621_00599	Multidrug export protein MepA	TC	36038	37372	-	2.A.66.1.33
MGYG000000621_00600	hypothetical protein	CAZyme	37423	39447	-	GH35
MGYG000000621_00601	hypothetical protein	STP	39602	43051	-	TPR_1
MGYG000000621_00602	hypothetical protein	CAZyme	43091	45925	-	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature