dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00459
Location and strand information: 548582 - 551848 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00460
Location and strand information: 551902 - 553875 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00461
Location and strand information: 553896 - 555191 (+)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0144
Protein molecular weight: 47129.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00462
Location and strand information: 555300 - 557447 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00463
Location and strand information: 557478 - 561098 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00464
Location and strand information: 561101 - 562624 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9576
Protein molecular weight: 57130.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00465
Location and strand information: 562644 - 563801 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.7328
Protein molecular weight: 44108.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00466
Location and strand information: 563845 - 565515 (+)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 6.7394
Protein molecular weight: 61617.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00467
Location and strand information: 565540 - 566844 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1927
Protein molecular weight: 49379.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00468
Location and strand information: 566875 - 567477 (+)
Family: null
Protein type: null
Protein description: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00469
Location and strand information: 567527 - 570277 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1062
Protein molecular weight: 105012.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00470
Location and strand information: 570394 - 571731 (-)
Family: GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.744
Protein molecular weight: 50648.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00471
Location and strand information: 571733 - 573166 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9713
Protein molecular weight: 53845.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00472
Location and strand information: 573144 - 575228 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2198
Protein molecular weight: 80667.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00473
Location and strand information: 575225 - 578020 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3304
Protein molecular weight: 105120.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00474
Location and strand information: 578121 - 581012 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.4619
Protein molecular weight: 110730.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00475
Location and strand information: 581399 - 583027 (+)
Family: CE12|GH43|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8472
Protein molecular weight: 61685.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00476
Location and strand information: 583116 - 587426 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00477
Location and strand information: 587859 - 589262 (+)
Family: null
Protein type: null
Protein description: Arylsulfatase

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00478
Location and strand information: 589547 - 592789 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00479
Location and strand information: 592803 - 594458 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00480
Location and strand information: 594879 - 597941 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00481
Location and strand information: 597989 - 600064 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00482
Location and strand information: 600233 - 602293 (+)
Family: PL11_1|PL11|CBM35|CBM2
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.9183
Protein molecular weight: 77012.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00483
Location and strand information: 602296 - 603525 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00484
Location and strand information: 603558 - 605714 (+)
Family: CE12|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9096
Protein molecular weight: 80680.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00485
Location and strand information: 605739 - 606746 (+)
Family: GH159|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2939
Protein molecular weight: 38416.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00486
Location and strand information: 606840 - 607154 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00487
Location and strand information: 607318 - 608592 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.967
Protein molecular weight: 46908.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00488
Location and strand information: 608688 - 609926 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.0284
Protein molecular weight: 47072.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00489
Location and strand information: 609929 - 612070 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.607
Protein molecular weight: 78486.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00490
Location and strand information: 612650 - 613474 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00491
Location and strand information: 613819 - 614493 (+)
Family: null
Protein type: null
Protein description: Acetylxylan esterase

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00492
Location and strand information: 614495 - 615973 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0029
Protein molecular weight: 53951.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00493
Location and strand information: 616100 - 616861 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00494
Location and strand information: 617033 - 619855 (-)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00495
Location and strand information: 620202 - 623363 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00496
Location and strand information: 623382 - 624896 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00497
Location and strand information: 624938 - 626314 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00498
Location and strand information: 626375 - 627475 (+)
Family: GH16|GH16_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6321
Protein molecular weight: 40843.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000815_1|CGC6
Gene ID: MGYG000000815_00499
Location and strand information: 627544 - 629769 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 6.1706
Protein molecular weight: 80190.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000815_00461	PL1_e44\|4.2.2.2	pectin
MGYG000000815_00464	GH105_e12
MGYG000000815_00465	GH105_e12
MGYG000000815_00466	GH28_e61
MGYG000000815_00467	GH105_e39
MGYG000000815_00469	GH115_e1\|3.2.1.-	arabinogalactan
MGYG000000815_00470	GH43_e7
MGYG000000815_00471	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000000815_00472	GH42_e7
MGYG000000815_00473	GH106_e0\|3.2.1.174	pectin
MGYG000000815_00474	GH2_e63\|3.2.1.23	beta-galactan
MGYG000000815_00475	GH43_e130\|3.2.1.55	xylan
MGYG000000815_00482	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000000815_00484	GH105_e35\|CE12_e40\|3.2.1.172	pectin
MGYG000000815_00485	GH0_e65
MGYG000000815_00487	CE12_e14
MGYG000000815_00488	GH105_e29
MGYG000000815_00489	GH28_e26\|3.2.1.-	pectin
MGYG000000815_00492	GH28_e52\|3.2.1.-	pectin
MGYG000000815_00498	GH16_e179
MGYG000000815_00499	GH3_e79\|3.2.1.21	beta-glucan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000815_00459	TonB-dependent receptor SusC	TC	548582	551848	+	1.B.14.6.1
MGYG000000815_00460	hypothetical protein	null	551902	553875	+	SusD-like_3\| SusD_RagB
MGYG000000815_00461	hypothetical protein	CAZyme	553896	555191	+	PL1\| PL1_2
MGYG000000815_00462	hypothetical protein	null	555300	557447	+	No domain
MGYG000000815_00463	hypothetical protein	null	557478	561098	+	DUF4450
MGYG000000815_00464	hypothetical protein	CAZyme	561101	562624	+	GH105
MGYG000000815_00465	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	562644	563801	+	GH105
MGYG000000815_00466	Exo-poly-alpha-D-galacturonosidase	CAZyme	563845	565515	+	GH28
MGYG000000815_00467	hypothetical protein	CAZyme	565540	566844	+	GH105
MGYG000000815_00468	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	null	566875	567477	+	PNP_UDP_1
MGYG000000815_00469	hypothetical protein	CAZyme	567527	570277	-	GH115
MGYG000000815_00470	hypothetical protein	CAZyme	570394	571731	-	GH43_24\| GH43
MGYG000000815_00471	hypothetical protein	CAZyme	571733	573166	-	GH28
MGYG000000815_00472	Beta-galactosidase	CAZyme	573144	575228	-	GH42
MGYG000000815_00473	hypothetical protein	CAZyme	575225	578020	-	GH106
MGYG000000815_00474	Beta-galactosidase	CAZyme	578121	581012	-	GH2
MGYG000000815_00475	hypothetical protein	CAZyme	581399	583027	+	CE12\| GH43\| GH43_18
MGYG000000815_00476	Sensor histidine kinase RcsC	TF	583116	587426	-	HTH_AraC
MGYG000000815_00477	Arylsulfatase	null	587859	589262	+	Sulfatase
MGYG000000815_00478	TonB-dependent receptor SusC	TC	589547	592789	+	1.B.14.6.1
MGYG000000815_00479	hypothetical protein	null	592803	594458	+	SusD-like_3\| SusD_RagB
MGYG000000815_00480	TonB-dependent receptor SusC	TC	594879	597941	+	1.B.14.6.1
MGYG000000815_00481	hypothetical protein	null	597989	600064	+	SusD-like_3\| SusD_RagB
MGYG000000815_00482	Rhamnogalacturonan endolyase YesW	CAZyme	600233	602293	+	PL11_1\| PL11\| CBM35\| CBM2
MGYG000000815_00483	hypothetical protein	null	602296	603525	+	Pectate_lyase22\| PD40
MGYG000000815_00484	hypothetical protein	CAZyme	603558	605714	+	CE12\| GH105
MGYG000000815_00485	hypothetical protein	CAZyme	605739	606746	+	GH159\| GH0
MGYG000000815_00486	L-rhamnose mutarotase	null	606840	607154	+	rhaM
MGYG000000815_00487	hypothetical protein	CAZyme	607318	608592	+	CE12
MGYG000000815_00488	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	608688	609926	+	GH105
MGYG000000815_00489	hypothetical protein	CAZyme	609929	612070	+	GH28
MGYG000000815_00490	hypothetical protein	null	612650	613474	+	No domain
MGYG000000815_00491	Acetylxylan esterase	null	613819	614493	+	Lipase_GDSL_2
MGYG000000815_00492	hypothetical protein	CAZyme	614495	615973	+	GH28
MGYG000000815_00493	hypothetical protein	null	616100	616861	+	GDPD
MGYG000000815_00494	hypothetical protein	TF	617033	619855	-	GerE
MGYG000000815_00495	TonB-dependent receptor SusC	TC	620202	623363	+	1.B.14.6.1
MGYG000000815_00496	SusD-like protein	null	623382	624896	+	SusD-like_3\| SusD_RagB
MGYG000000815_00497	hypothetical protein	null	624938	626314	+	No domain
MGYG000000815_00498	hypothetical protein	CAZyme	626375	627475	+	GH16\| GH16_3
MGYG000000815_00499	Beta-glucosidase BoGH3B	CAZyme	627544	629769	+	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature