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CAZyme Gene Cluster: MGYG000000852_29|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000000852_02025 | Non-reducing end beta-L-arabinofuranosidase |
CAZyme | 9116 | 11224 | + | GH127 |
| MGYG000000852_02026 | hypothetical protein |
CAZyme | 11203 | 12957 | + | GH141 |
| MGYG000000852_02027 | putative metabolite transport protein CsbC |
TC | 13082 | 14458 | + | 2.A.1.1.74 |
| MGYG000000852_02028 | hypothetical protein |
CAZyme | 14442 | 16544 | + | GH78 |
| MGYG000000852_02029 | hypothetical protein |
CAZyme | 16608 | 19229 | + | GH138 |
| MGYG000000852_02030 | Beta-galactosidase |
CAZyme | 19243 | 23283 | + | CBM57| GH2| GH137 |
| MGYG000000852_02031 | Beta-galactosidase |
CAZyme | 23289 | 26441 | + | GH2 |
| MGYG000000852_02032 | Xylan 1,4-beta-xylosidase |
CAZyme | 27442 | 29481 | - | CBM6| GH3 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000000852_02025 | GH127_e2|3.2.1.- | carrageenan |
| MGYG000000852_02026 | GH141_e0|3.2.1.51 | pectin |
| MGYG000000852_02028 | GH78_e26|3.2.1.40 | alpha-rhamnoside |
| MGYG000000852_02029 | GH138_e0|3.2.1.- | |
| MGYG000000852_02030 | GH2_e49|GH137_e0|CBM57_e1|3.2.1.31|3.2.1.185 | pectin|beta-glucuronan |
| MGYG000000852_02031 | GH2_e2|3.2.1.23 | beta-galactan |
| MGYG000000852_02032 | GH3_e92|3.2.1.21 | beta-glucan |
Substrate predicted by dbCAN-PUL is pectin download this fig
