dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00026
Location and strand information: 30379 - 30717 (-)
Family: 4.A.3.1.2
Protein type: TC
Protein description: PTS system lactose-specific EIIA component

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00027
Location and strand information: 30932 - 31936 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00028
Location and strand information: 32294 - 34069 (+)
Family: 4.A.3.1.1
Protein type: TC
Protein description: PTS system lactose-specific EIICB component

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00029
Location and strand information: 34136 - 35575 (+)
Family: GH1
Protein type: CAZyme
Protein description: 6-phospho-beta-galactosidase
Protein isoelectric point: 4.9142
Protein molecular weight: 54909.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00030
Location and strand information: 35843 - 36880 (-)
Family: LacI
Protein type: TF
Protein description: Lactose operon repressor

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00031
Location and strand information: 37221 - 38663 (+)
Family: GH1
Protein type: CAZyme
Protein description: 6-phospho-beta-galactosidase
Protein isoelectric point: 4.8723
Protein molecular weight: 54371.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00032
Location and strand information: 38840 - 40600 (+)
Family: 4.A.3.1.1
Protein type: TC
Protein description: PTS system lactose-specific EIICB component

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00033
Location and strand information: 40774 - 41775 (-)
Family: LacI
Protein type: TF
Protein description: Lactose operon repressor

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00034
Location and strand information: 42060 - 43838 (+)
Family: 4.A.3.1.1
Protein type: TC
Protein description: PTS system lactose-specific EIICB component

Gene clsuter ID: MGYG000000868_1|CGC1
Gene ID: MGYG000000868_00035
Location and strand information: 43914 - 45335 (+)
Family: GH1
Protein type: CAZyme
Protein description: 6-phospho-beta-galactosidase
Protein isoelectric point: 4.5729
Protein molecular weight: 53429.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000868_00029	GH1_e2\|3.2.1.85	beta-galactan
MGYG000000868_00031	GH1_e2\|3.2.1.85	beta-galactan
MGYG000000868_00035	GH1_e2\|3.2.1.85	beta-galactan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-galactan

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000868_00026	PTS system lactose-specific EIIA component	TC	30379	30717	-	4.A.3.1.2
MGYG000000868_00027	HTH-type transcriptional repressor CytR	TF	30932	31936	-	LacI
MGYG000000868_00028	PTS system lactose-specific EIICB component	TC	32294	34069	+	4.A.3.1.1
MGYG000000868_00029	6-phospho-beta-galactosidase	CAZyme	34136	35575	+	GH1
MGYG000000868_00030	Lactose operon repressor	TF	35843	36880	-	LacI
MGYG000000868_00031	6-phospho-beta-galactosidase	CAZyme	37221	38663	+	GH1
MGYG000000868_00032	PTS system lactose-specific EIICB component	TC	38840	40600	+	4.A.3.1.1
MGYG000000868_00033	Lactose operon repressor	TF	40774	41775	-	LacI
MGYG000000868_00034	PTS system lactose-specific EIICB component	TC	42060	43838	+	4.A.3.1.1
MGYG000000868_00035	6-phospho-beta-galactosidase	CAZyme	43914	45335	+	GH1
Protein ID	Protein Name	Type	Start	End	Strand	Signature