dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01446
Location and strand information: 47794 - 48834 (-)
Family: GT2|GT27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6561
Protein molecular weight: 40323.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01447
Location and strand information: 48849 - 50201 (-)
Family: null
Protein type: null
Protein description: Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01448
Location and strand information: 50501 - 52114 (+)
Family: CBM35|GH27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8024
Protein molecular weight: 60209.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01449
Location and strand information: 52853 - 53806 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01450
Location and strand information: 53945 - 55228 (+)
Family: 2.A.1.1.55
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01451
Location and strand information: 55272 - 58532 (+)
Family: TPR_2+TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01452
Location and strand information: 58543 - 60600 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5921
Protein molecular weight: 77650.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01453
Location and strand information: 60597 - 63395 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.3276
Protein molecular weight: 105391.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_17|CGC2
Gene ID: MGYG000001001_01454
Location and strand information: 63559 - 66639 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001001_01446	hypothetical protein	CAZyme	47794	48834	-	GT2\| GT27
MGYG000001001_01447	Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB	null	48849	50201	-	UPF0004\| Radical_SAM
MGYG000001001_01448	hypothetical protein	CAZyme	50501	52114	+	CBM35\| GH27
MGYG000001001_01449	HTH-type transcriptional activator RhaR	TF	52853	53806	-	HTH_AraC+HTH_AraC
MGYG000001001_01450	D-xylose-proton symporter	TC	53945	55228	+	2.A.1.1.55
MGYG000001001_01451	hypothetical protein	STP	55272	58532	+	TPR_2\| TPR_2
MGYG000001001_01452	hypothetical protein	CAZyme	58543	60600	+	GH35
MGYG000001001_01453	Beta-galactosidase	CAZyme	60597	63395	+	GH2
MGYG000001001_01454	TonB-dependent receptor SusC	TC	63559	66639	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature