dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00545
Location and strand information: 56596 - 57786 (-)
Family: 1.B.57.4.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00546
Location and strand information: 57876 - 61490 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00547
Location and strand information: 61626 - 62243 (-)
Family: null
Protein type: null
Protein description: putative protein YcgM

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00548
Location and strand information: 62254 - 63546 (-)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 8.0773
Protein molecular weight: 48195.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00549
Location and strand information: 64832 - 67600 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00550
Location and strand information: 67612 - 67818 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00551
Location and strand information: 68101 - 71295 (+)
Family: CBM35|CBM25|CBM26|GH13_42|GH13
Protein type: CAZyme
Protein description: Glycogen debranching enzyme
Protein isoelectric point: 5.8694
Protein molecular weight: 116267.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00552
Location and strand information: 71321 - 73969 (+)
Family: CBM26|GH13_28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1541
Protein molecular weight: 95012.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00553
Location and strand information: 74644 - 78738 (+)
Family: null
Protein type: null
Protein description: RNA polymerase-associated protein RapA

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00554
Location and strand information: 79000 - 79287 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00555
Location and strand information: 79505 - 81412 (-)
Family: GH13
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 6.7115
Protein molecular weight: 72397.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00556
Location and strand information: 81426 - 83285 (-)
Family: CBM41|CBM48|CBM20|GH13_14|GH13
Protein type: CAZyme
Protein description: Pullulanase
Protein isoelectric point: 6.7818
Protein molecular weight: 69115.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00557
Location and strand information: 83439 - 85580 (-)
Family: GH97
Protein type: CAZyme
Protein description: Glucan 1,4-alpha-glucosidase SusB
Protein isoelectric point: 6.6134
Protein molecular weight: 80732.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00558
Location and strand information: 85615 - 88311 (-)
Family: CBM20|GH77
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0462
Protein molecular weight: 104961.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00559
Location and strand information: 88538 - 89110 (-)
Family: 9.B.196.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00560
Location and strand information: 89233 - 90543 (-)
Family: 2.A.2.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00561
Location and strand information: 90656 - 91657 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00562
Location and strand information: 92224 - 93246 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00563
Location and strand information: 93627 - 96731 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001001_5|CGC2
Gene ID: MGYG000001001_00564
Location and strand information: 96752 - 98335 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001001_00548
MGYG000001001_00551	GH13_e34\|CBM35_e2\|CBM26_e0\|CBM25_e9\|3.2.1.98\|3.2.1.59\|3.2.1.1	starch
MGYG000001001_00552
MGYG000001001_00555	GH13_e161\|3.2.1.54	starch
MGYG000001001_00556	GH13_e38\|CBM48_e41\|CBM41_e2\|CBM20_e23\|3.2.1.68\|3.2.1.41\|3.2.1.1\|3.2.1.-	starch
MGYG000001001_00557	GH97_e1\|3.2.1.3\|3.2.1.20	alpha-glucan
MGYG000001001_00558	GH77_e3\|CBM20_e9\|2.4.1.25	starch

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001001_00545	hypothetical protein	TC	56596	57786	-	1.B.57.4.6
MGYG000001001_00546	hypothetical protein	null	57876	61490	-	Peptidase_C25
MGYG000001001_00547	putative protein YcgM	null	61626	62243	-	FAA_hydrolase
MGYG000001001_00548	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	62254	63546	-	GH53
MGYG000001001_00549	hypothetical protein	null	64832	67600	+	CBM26
MGYG000001001_00550	hypothetical protein	null	67612	67818	+	No domain
MGYG000001001_00551	Glycogen debranching enzyme	CAZyme	68101	71295	+	CBM35\| CBM25\| CBM26\| GH13_42\| GH13
MGYG000001001_00552	hypothetical protein	CAZyme	71321	73969	+	CBM26\| GH13_28
MGYG000001001_00553	RNA polymerase-associated protein RapA	null	74644	78738	+	SNF2-rel_dom\| Helicase_C
MGYG000001001_00554	hypothetical protein	null	79000	79287	+	Lys_export
MGYG000001001_00555	1,4-alpha-glucan branching enzyme GlgB	CAZyme	79505	81412	-	GH13
MGYG000001001_00556	Pullulanase	CAZyme	81426	83285	-	CBM41\| CBM48\| CBM20\| GH13_14\| GH13
MGYG000001001_00557	Glucan 1,4-alpha-glucosidase SusB	CAZyme	83439	85580	-	GH97
MGYG000001001_00558	hypothetical protein	CAZyme	85615	88311	-	CBM20\| GH77
MGYG000001001_00559	hypothetical protein	TC	88538	89110	-	9.B.196.1.2
MGYG000001001_00560	hypothetical protein	TC	89233	90543	-	2.A.2.6.2
MGYG000001001_00561	HTH-type transcriptional repressor CytR	TF	90656	91657	-	LacI
MGYG000001001_00562	hypothetical protein	null	92224	93246	+	No domain
MGYG000001001_00563	TonB-dependent receptor SusC	TC	93627	96731	+	1.B.14.6.1
MGYG000001001_00564	Starch-binding protein SusD	TC	96752	98335	+	8.A.46.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature