dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00030
Location and strand information: 37 - 2019 (-)
Family: GH43_27|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3589
Protein molecular weight: 73298.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00031
Location and strand information: 2052 - 2486 (-)
Family: null
Protein type: null
Protein description: Reducing end xylose-releasing exo-oligoxylanase

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00032
Location and strand information: 2975 - 4729 (+)
Family: CE17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5081
Protein molecular weight: 64969.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00033
Location and strand information: 4758 - 6914 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 4.8773
Protein molecular weight: 78174.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00034
Location and strand information: 6943 - 7896 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00035
Location and strand information: 7913 - 8806 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00036
Location and strand information: 8946 - 10679 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00037
Location and strand information: 10895 - 14341 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.9331
Protein molecular weight: 127125
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00038
Location and strand information: 14353 - 15471 (+)
Family: null
Protein type: null
Protein description: Cysteine desulfurase IscS

Gene clsuter ID: MGYG000001015_2|CGC1
Gene ID: MGYG000001015_00039
Location and strand information: 15501 - 17459 (+)
Family: GH67
Protein type: CAZyme
Protein description: Xylan alpha-(1->2)-glucuronosidase
Protein isoelectric point: 5.1928
Protein molecular weight: 73314.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001015_00030	GH43_e172
MGYG000001015_00032
MGYG000001015_00033	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000001015_00037	GH2_e103\|3.2.1.23	beta-galactan
MGYG000001015_00039	GH67_e1\|3.2.1.139\|3.2.1.131	xylan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001015_00030	hypothetical protein	CAZyme	37	2019	-	GH43_27\| GH43
MGYG000001015_00031	Reducing end xylose-releasing exo-oligoxylanase	null	2052	2486	-	Glyco_hydro_8
MGYG000001015_00032	hypothetical protein	CAZyme	2975	4729	+	CE17
MGYG000001015_00033	Beta-hexosaminidase	CAZyme	4758	6914	+	GH3
MGYG000001015_00034	putative multiple-sugar transport system permease YteP	TC	6943	7896	+	3.A.1.1.10
MGYG000001015_00035	L-arabinose transport system permease protein AraQ	TC	7913	8806	+	3.A.1.1.29
MGYG000001015_00036	hypothetical protein	STP	8946	10679	+	SBP_bac_1
MGYG000001015_00037	Beta-galactosidase	CAZyme	10895	14341	+	GH2
MGYG000001015_00038	Cysteine desulfurase IscS	null	14353	15471	+	Aminotran_5
MGYG000001015_00039	Xylan alpha-(1->2)-glucuronosidase	CAZyme	15501	17459	+	GH67
Protein ID	Protein Name	Type	Start	End	Strand	Signature