dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01139
Location and strand information: 11464 - 13416 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01140
Location and strand information: 13420 - 14370 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01141
Location and strand information: 14370 - 15296 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppC

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01142
Location and strand information: 15313 - 16362 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01143
Location and strand information: 16369 - 17304 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01144
Location and strand information: 17311 - 17736 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01145
Location and strand information: 17970 - 19595 (+)
Family: 3.A.1.5.27
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01146
Location and strand information: 19714 - 20646 (+)
Family: 3.A.1.5.11
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01147
Location and strand information: 20655 - 21560 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01148
Location and strand information: 21575 - 22567 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01149
Location and strand information: 22564 - 23562 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01150
Location and strand information: 23616 - 24701 (+)
Family: null
Protein type: null
Protein description: Hydrophobic dipeptide epimerase

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01151
Location and strand information: 24698 - 26110 (+)
Family: null
Protein type: null
Protein description: D-aminopeptidase

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01152
Location and strand information: 26388 - 28274 (+)
Family: 3.A.1.120.6
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01153
Location and strand information: 28261 - 29424 (+)
Family: null
Protein type: null
Protein description: Isoaspartyl dipeptidase

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01154
Location and strand information: 29454 - 30329 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01155
Location and strand information: 30582 - 32954 (+)
Family: PL9|CE12|PL9_1
Protein type: CAZyme
Protein description: Pectate disaccharide-lyase
Protein isoelectric point: 4.1626
Protein molecular weight: 84871.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01156
Location and strand information: 33169 - 33879 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: Alkaline phosphatase synthesis transcriptional regulatory protein PhoP

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01157
Location and strand information: 33848 - 36292 (+)
Family: HisKA+HATPase_c
Protein type: STP
Protein description: Adaptive-response sensory-kinase SasA

Gene clsuter ID: MGYG000001065_20|CGC1
Gene ID: MGYG000001065_01158
Location and strand information: 36578 - 38884 (+)
Family: PL11|CE12|PL11_1|CBM2|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan exolyase YesX
Protein isoelectric point: 4.3293
Protein molecular weight: 85028.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001065_01139	Oligopeptide-binding protein SarA	TC	11464	13416	+	3.A.1.5.25
MGYG000001065_01140	Dipeptide transport system permease protein DppB	TC	13420	14370	+	3.A.1.5.25
MGYG000001065_01141	Oligopeptide transport system permease protein OppC	TC	14370	15296	+	3.A.1.5.19
MGYG000001065_01142	Oligopeptide transport ATP-binding protein OppD	TC	15313	16362	+	3.A.1.5.25
MGYG000001065_01143	Oligopeptide transport ATP-binding protein OppF	TC	16369	17304	+	3.A.1.5.25
MGYG000001065_01144	hypothetical protein	null	17311	17736	+	No domain
MGYG000001065_01145	hypothetical protein	TC	17970	19595	+	3.A.1.5.27
MGYG000001065_01146	Glutathione transport system permease protein GsiC	TC	19714	20646	+	3.A.1.5.11
MGYG000001065_01147	Glutathione transport system permease protein GsiD	TC	20655	21560	+	3.A.1.5.2
MGYG000001065_01148	Oligopeptide transport ATP-binding protein OppD	TC	21575	22567	+	3.A.1.5.20
MGYG000001065_01149	Oligopeptide transport ATP-binding protein OppF	TC	22564	23562	+	3.A.1.5.20
MGYG000001065_01150	Hydrophobic dipeptide epimerase	null	23616	24701	+	MR_MLE_N\| MR_MLE_C
MGYG000001065_01151	D-aminopeptidase	null	24698	26110	+	Beta-lactamase
MGYG000001065_01152	Vitamin B12 import ATP-binding protein BtuD	TC	26388	28274	+	3.A.1.120.6
MGYG000001065_01153	Isoaspartyl dipeptidase	null	28261	29424	+	Amidohydro_1
MGYG000001065_01154	hypothetical protein	null	29454	30329	+	BD-FAE
MGYG000001065_01155	Pectate disaccharide-lyase	CAZyme	30582	32954	+	PL9\| CE12\| PL9_1
MGYG000001065_01156	Alkaline phosphatase synthesis transcriptional regulatory protein PhoP	TF	33169	33879	+	Trans_reg_C
MGYG000001065_01157	Adaptive-response sensory-kinase SasA	STP	33848	36292	+	HisKA\| HATPase_c
MGYG000001065_01158	Rhamnogalacturonan exolyase YesX	CAZyme	36578	38884	+	PL11\| CE12\| PL11_1\| CBM2\| CBM35
Protein ID	Protein Name	Type	Start	End	Strand	Signature