dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00549
Location and strand information: 510995 - 511663 (+)
Family: 8.A.3.2.4
Protein type: TC
Protein description: Capsular polysaccharide type 8 biosynthesis protein cap8A

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00550
Location and strand information: 511679 - 512380 (+)
Family: 8.A.3.2.1
Protein type: TC
Protein description: Tyrosine-protein kinase YwqD

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00551
Location and strand information: 512377 - 513144 (+)
Family: null
Protein type: null
Protein description: Tyrosine-protein phosphatase YwqE

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00552
Location and strand information: 513175 - 514974 (+)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00553
Location and strand information: 514971 - 516017 (+)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-glucose 4-epimerase

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00554
Location and strand information: 516032 - 517141 (+)
Family: null
Protein type: null
Protein description: UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00555
Location and strand information: 517143 - 518267 (+)
Family: GT0
Protein type: CAZyme
Protein description: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase
Protein isoelectric point: 5.4704
Protein molecular weight: 42688.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00556
Location and strand information: 518264 - 518902 (+)
Family: null
Protein type: null
Protein description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

Gene clsuter ID: MGYG000001298_1|CGC10
Gene ID: MGYG000001298_00557
Location and strand information: 518910 - 520022 (+)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.2609
Protein molecular weight: 42694.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001298_00549	Capsular polysaccharide type 8 biosynthesis protein cap8A	TC	510995	511663	+	8.A.3.2.4
MGYG000001298_00550	Tyrosine-protein kinase YwqD	TC	511679	512380	+	8.A.3.2.1
MGYG000001298_00551	Tyrosine-protein phosphatase YwqE	null	512377	513144	+	CpsB_CapC
MGYG000001298_00552	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	513175	514974	+	9.B.18.2.1
MGYG000001298_00553	UDP-glucose 4-epimerase	TC	514971	516017	+	9.B.18.2.1
MGYG000001298_00554	UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase	null	516032	517141	+	Epimerase
MGYG000001298_00555	UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase	CAZyme	517143	518267	+	GT0
MGYG000001298_00556	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	null	518264	518902	+	Hexapep
MGYG000001298_00557	hypothetical protein	CAZyme	518910	520022	+	GT4
Protein ID	Protein Name	Type	Start	End	Strand	Signature