dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01923
Location and strand information: 1397215 - 1399971 (-)
Family: GT51
Protein type: CAZyme
Protein description: Penicillin-binding protein 1A
Protein isoelectric point: 5.2887
Protein molecular weight: 99555.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01924
Location and strand information: 1400119 - 1400772 (+)
Family: null
Protein type: null
Protein description: IMPACT family member YigZ

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01925
Location and strand information: 1401195 - 1402775 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01926
Location and strand information: 1402915 - 1404408 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01927
Location and strand information: 1404423 - 1405280 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01928
Location and strand information: 1405508 - 1406239 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.1936
Protein molecular weight: 28020.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01929
Location and strand information: 1406281 - 1408221 (+)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 5.4238
Protein molecular weight: 73905.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01930
Location and strand information: 1408272 - 1409366 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.1161
Protein molecular weight: 42817.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01931
Location and strand information: 1409392 - 1410945 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1781
Protein molecular weight: 57161.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001314_8|CGC12
Gene ID: MGYG000001314_01932
Location and strand information: 1410970 - 1412769 (+)
Family: 3.A.1.106.2
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001314_01923	Penicillin-binding protein 1A	CAZyme	1397215	1399971	-	GT51
MGYG000001314_01924	IMPACT family member YigZ	null	1400119	1400772	+	UPF0029\| DUF1949
MGYG000001314_01925	hypothetical protein	STP	1401195	1402775	+	SBP_bac_1
MGYG000001314_01926	hypothetical protein	TC	1402915	1404408	+	3.A.1.1.10
MGYG000001314_01927	L-arabinose transport system permease protein AraQ	TC	1404423	1405280	+	3.A.1.1.29
MGYG000001314_01928	Rhamnogalacturonan acetylesterase RhgT	CAZyme	1405508	1406239	+	CE12
MGYG000001314_01929	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	1406281	1408221	+	GH43\| GH43_12
MGYG000001314_01930	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	1408272	1409366	+	GH105
MGYG000001314_01931	hypothetical protein	CAZyme	1409392	1410945	+	GH28
MGYG000001314_01932	Putative multidrug export ATP-binding/permease protein	TC	1410970	1412769	+	3.A.1.106.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature