dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00786
Location and strand information: 227986 - 229239 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6955
Protein molecular weight: 48027.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00787
Location and strand information: 229232 - 230563 (+)
Family: GH145|PL42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7478
Protein molecular weight: 50163.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00788
Location and strand information: 230581 - 231708 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.8411
Protein molecular weight: 43218.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00789
Location and strand information: 231819 - 233759 (+)
Family: GH43_19|GH43|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9338
Protein molecular weight: 72845.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00790
Location and strand information: 233790 - 235736 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.047
Protein molecular weight: 73189.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00791
Location and strand information: 235962 - 238502 (+)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6066
Protein molecular weight: 94535.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00792
Location and strand information: 238552 - 240543 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.8457
Protein molecular weight: 74686.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00793
Location and strand information: 240598 - 242547 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 5.4694
Protein molecular weight: 73353.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00794
Location and strand information: 242726 - 245821 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2921
Protein molecular weight: 117566.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00795
Location and strand information: 245958 - 250022 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00796
Location and strand information: 250402 - 253722 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00797
Location and strand information: 253735 - 255720 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00798
Location and strand information: 255824 - 256912 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00799
Location and strand information: 256937 - 259096 (+)
Family: GH16_3|GH43_24|GH105|GH16|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6043
Protein molecular weight: 82462.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00800
Location and strand information: 259056 - 259628 (-)
Family: null
Protein type: null
Protein description: DNA-3-methyladenine glycosylase 1

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00801
Location and strand information: 259791 - 260972 (+)
Family: null
Protein type: null
Protein description: Mannonate dehydratase

Gene clsuter ID: MGYG000001346_13|CGC4
Gene ID: MGYG000001346_00802
Location and strand information: 261087 - 264407 (-)
Family: CBM32|GH35|GH43|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9447
Protein molecular weight: 125286.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001346_00786
MGYG000001346_00787	GH145_e0\|3.2.1.-
MGYG000001346_00788	GH105_e2\|3.2.1.-	pectin
MGYG000001346_00789	GH43_e38\|3.2.1.55	xylan
MGYG000001346_00790	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000001346_00791	GH51_e23\|3.2.1.55	arabinan
MGYG000001346_00792	GH127_e7
MGYG000001346_00793	GH51_e23\|3.2.1.55	arabinan
MGYG000001346_00794	GH2_e4\|3.2.1.23	beta-galactan
MGYG000001346_00799	GH43_e135\|GH16_e47
MGYG000001346_00802	GH43_e161

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001346_00786	hypothetical protein	CAZyme	227986	229239	+	GH154
MGYG000001346_00787	hypothetical protein	CAZyme	229232	230563	+	GH145\| PL42
MGYG000001346_00788	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	230581	231708	+	GH105
MGYG000001346_00789	hypothetical protein	CAZyme	231819	233759	+	GH43_19\| GH43\| GH43_34
MGYG000001346_00790	Retaining alpha-galactosidase	CAZyme	233790	235736	+	GH97
MGYG000001346_00791	hypothetical protein	CAZyme	235962	238502	+	GH51
MGYG000001346_00792	Non-reducing end beta-L-arabinofuranosidase	CAZyme	238552	240543	+	GH127
MGYG000001346_00793	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	240598	242547	+	GH51
MGYG000001346_00794	Beta-galactosidase	CAZyme	242726	245821	+	GH2
MGYG000001346_00795	Sensor histidine kinase RcsC	TF	245958	250022	-	HTH_AraC
MGYG000001346_00796	hypothetical protein	TC	250402	253722	+	1.B.14.6.1
MGYG000001346_00797	hypothetical protein	null	253735	255720	+	SusD-like_3\| SusD_RagB
MGYG000001346_00798	hypothetical protein	null	255824	256912	+	No domain
MGYG000001346_00799	hypothetical protein	CAZyme	256937	259096	+	GH16_3\| GH43_24\| GH105\| GH16\| GH43
MGYG000001346_00800	DNA-3-methyladenine glycosylase 1	null	259056	259628	-	Adenine_glyco
MGYG000001346_00801	Mannonate dehydratase	null	259791	260972	+	UxuA
MGYG000001346_00802	hypothetical protein	CAZyme	261087	264407	-	CBM32\| GH35\| GH43\| GH43_24
Protein ID	Protein Name	Type	Start	End	Strand	Signature