dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03256
Location and strand information: 873309 - 874835 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03257
Location and strand information: 874914 - 877157 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3082
Protein molecular weight: 85609.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03258
Location and strand information: 877453 - 878424 (-)
Family: GH130
Protein type: CAZyme
Protein description: 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase
Protein isoelectric point: 5.6421
Protein molecular weight: 36849.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03259
Location and strand information: 878448 - 879758 (-)
Family: null
Protein type: null
Protein description: Protein AmpG

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03260
Location and strand information: 879780 - 882050 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1686
Protein molecular weight: 85061.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03261
Location and strand information: 882101 - 882241 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03262
Location and strand information: 882217 - 884199 (-)
Family: GH18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5182
Protein molecular weight: 73999.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03263
Location and strand information: 884238 - 885392 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03264
Location and strand information: 885402 - 886415 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03265
Location and strand information: 886438 - 888027 (-)
Family: 8.A.46.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03266
Location and strand information: 888039 - 891425 (-)
Family: 1.B.14.6.13
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03267
Location and strand information: 891729 - 894005 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0538
Protein molecular weight: 86924.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03268
Location and strand information: 894071 - 895060 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03269
Location and strand information: 895072 - 895665 (-)
Family: GerE
Protein type: TF
Protein description: RNA polymerase sigma factor FliA

Gene clsuter ID: MGYG000001346_15|CGC12
Gene ID: MGYG000001346_03270
Location and strand information: 895677 - 897908 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7898
Protein molecular weight: 84196.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001346_03257	GH92_e22\|3.2.1.24	hostglycan
MGYG000001346_03258	GH130_e1\|2.4.1.320\|2.4.1.319\|2.4.1.-	beta-mannan
MGYG000001346_03260	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan
MGYG000001346_03262	GH18_e81\|3.2.1.96	hostglycan
MGYG000001346_03267	GH92_e8\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000001346_03270	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001346_03256	Sensor histidine kinase RcsC	TC	873309	874835	+	2.A.21.9.2
MGYG000001346_03257	hypothetical protein	CAZyme	874914	877157	-	GH92
MGYG000001346_03258	1,4-beta-mannosyl-N-acetylglucosamine phosphorylase	CAZyme	877453	878424	-	GH130
MGYG000001346_03259	Protein AmpG	null	878448	879758	-	MFS_1
MGYG000001346_03260	hypothetical protein	CAZyme	879780	882050	-	GH92
MGYG000001346_03261	hypothetical protein	null	882101	882241	+	No domain
MGYG000001346_03262	hypothetical protein	CAZyme	882217	884199	-	GH18
MGYG000001346_03263	hypothetical protein	null	884238	885392	-	DUF1735\| Laminin_G_3
MGYG000001346_03264	hypothetical protein	null	885402	886415	-	DUF4849
MGYG000001346_03265	hypothetical protein	TC	886438	888027	-	8.A.46.2.2
MGYG000001346_03266	TonB-dependent receptor SusC	TC	888039	891425	-	1.B.14.6.13
MGYG000001346_03267	hypothetical protein	CAZyme	891729	894005	-	GH92
MGYG000001346_03268	hypothetical protein	STP	894071	895060	-	FecR
MGYG000001346_03269	RNA polymerase sigma factor FliA	TF	895072	895665	-	GerE
MGYG000001346_03270	hypothetical protein	CAZyme	895677	897908	-	GH92
Protein ID	Protein Name	Type	Start	End	Strand	Signature