dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00871
Location and strand information: 1046475 - 1047995 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00872
Location and strand information: 1048010 - 1049014 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00873
Location and strand information: 1049118 - 1050101 (+)
Family: 3.A.1.2.6
Protein type: TC
Protein description: D-allose-binding periplasmic protein

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00874
Location and strand information: 1050362 - 1051399 (-)
Family: GH43_22|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3828
Protein molecular weight: 39129.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00875
Location and strand information: 1051465 - 1052568 (-)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00876
Location and strand information: 1052836 - 1054245 (+)
Family: GH27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6373
Protein molecular weight: 52695.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00877
Location and strand information: 1054262 - 1056583 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 4.3617
Protein molecular weight: 85331.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00878
Location and strand information: 1056608 - 1058164 (+)
Family: 2.A.2.5.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00879
Location and strand information: 1058175 - 1059131 (+)
Family: null
Protein type: null
Protein description: Tat-linked quality control protein TatD

Gene clsuter ID: MGYG000001354_1|CGC22
Gene ID: MGYG000001354_00880
Location and strand information: 1059296 - 1061473 (+)
Family: 2.A.72.1.3
Protein type: TC
Protein description: Low affinity potassium transport system protein kup

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001354_00871	Ribose import ATP-binding protein RbsA	TC	1046475	1047995	+	3.A.1.2.1
MGYG000001354_00872	Ribose import permease protein RbsC	TC	1048010	1049014	+	3.A.1.2.1
MGYG000001354_00873	D-allose-binding periplasmic protein	TC	1049118	1050101	+	3.A.1.2.6
MGYG000001354_00874	hypothetical protein	CAZyme	1050362	1051399	-	GH43_22\| GH43
MGYG000001354_00875	Catabolite control protein A	TF	1051465	1052568	-	LacI
MGYG000001354_00876	hypothetical protein	CAZyme	1052836	1054245	+	GH27
MGYG000001354_00877	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	1054262	1056583	+	GH51
MGYG000001354_00878	hypothetical protein	TC	1056608	1058164	+	2.A.2.5.1
MGYG000001354_00879	Tat-linked quality control protein TatD	null	1058175	1059131	+	TatD_DNase
MGYG000001354_00880	Low affinity potassium transport system protein kup	TC	1059296	1061473	+	2.A.72.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature