dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03370
Location and strand information: 12415 - 13473 (-)
Family: 8.A.5.1.6
Protein type: TC
Protein description: Aldo-keto reductase IolS

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03371
Location and strand information: 14567 - 18577 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03372
Location and strand information: 19113 - 20315 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1426
Protein molecular weight: 46596.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03373
Location and strand information: 20329 - 21810 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3747
Protein molecular weight: 56601.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03374
Location and strand information: 21841 - 24135 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2561
Protein molecular weight: 87758.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03375
Location and strand information: 24150 - 26096 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.6251
Protein molecular weight: 74592.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03376
Location and strand information: 26129 - 27436 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03377
Location and strand information: 27466 - 28770 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03378
Location and strand information: 28798 - 31923 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03379
Location and strand information: 31935 - 33923 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03380
Location and strand information: 33937 - 34902 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03381
Location and strand information: 35003 - 36541 (+)
Family: 3.2.1.101|GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5155
Protein molecular weight: 58240.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001376_10|CGC1
Gene ID: MGYG000001376_03382
Location and strand information: 36587 - 40177 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.3529
Protein molecular weight: 137531.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001376_03372	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000001376_03373	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000001376_03374	GH92_e8\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000001376_03375	GH97_e20\|3.2.1.22	alpha-glucan
MGYG000001376_03381	GH76_e20\|3.2.1.101	alpha-mannan
MGYG000001376_03382

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001376_03370	Aldo-keto reductase IolS	TC	12415	13473	-	8.A.5.1.6
MGYG000001376_03371	Sensor histidine kinase RcsC	TF	14567	18577	-	HTH_AraC
MGYG000001376_03372	hypothetical protein	CAZyme	19113	20315	+	GH76
MGYG000001376_03373	hypothetical protein	CAZyme	20329	21810	+	GH125
MGYG000001376_03374	hypothetical protein	CAZyme	21841	24135	+	GH92
MGYG000001376_03375	Retaining alpha-galactosidase	CAZyme	24150	26096	+	GH97
MGYG000001376_03376	hypothetical protein	null	26129	27436	+	Big_2\| Big_2\| Big_2\| F5_F8_type_C
MGYG000001376_03377	hypothetical protein	null	27466	28770	+	TIG\| NHL
MGYG000001376_03378	hypothetical protein	TC	28798	31923	+	1.B.14.6.1
MGYG000001376_03379	hypothetical protein	null	31935	33923	+	SusD-like_3\| SusD_RagB
MGYG000001376_03380	hypothetical protein	null	33937	34902	+	DUF1735\| DUF4361
MGYG000001376_03381	hypothetical protein	CAZyme	35003	36541	+	3.2.1.101\| GH76
MGYG000001376_03382	Evolved beta-galactosidase subunit alpha	CAZyme	36587	40177	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature