dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00299
Location and strand information: 441410 - 442210 (-)
Family: CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.0398
Protein molecular weight: 29746.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00300
Location and strand information: 442227 - 445193 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0586
Protein molecular weight: 113205.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00301
Location and strand information: 445195 - 447117 (-)
Family: PL11|CBM2|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.4175
Protein molecular weight: 71115.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00302
Location and strand information: 447240 - 450203 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.2172
Protein molecular weight: 113385.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00303
Location and strand information: 450234 - 451853 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00304
Location and strand information: 451868 - 455023 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00305
Location and strand information: 455134 - 456096 (-)
Family: CE4|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.7389
Protein molecular weight: 37180.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00306
Location and strand information: 456112 - 457626 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00307
Location and strand information: 457875 - 459929 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.2124
Protein molecular weight: 78573.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00308
Location and strand information: 459971 - 461554 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4999
Protein molecular weight: 57740.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00309
Location and strand information: 461705 - 464680 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.1947
Protein molecular weight: 113627.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00310
Location and strand information: 464716 - 465837 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3895
Protein molecular weight: 42875.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_1|CGC11
Gene ID: MGYG000001378_00311
Location and strand information: 466068 - 467984 (+)
Family: PL11|CBM2|CBM35|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.4315
Protein molecular weight: 71304.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001378_00299	CE6_e5
MGYG000001378_00300	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000001378_00301	PL11_e0\|CBM2_e72\|4.2.2.23	pectin
MGYG000001378_00302	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000001378_00305	CE4_e36
MGYG000001378_00307	GH2_e17
MGYG000001378_00308	GH28_e22
MGYG000001378_00309	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000001378_00310	GH105_e14\|3.2.1.172	pectin
MGYG000001378_00311	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-glucuronan|pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_00299	hypothetical protein	CAZyme	441410	442210	-	CE6
MGYG000001378_00300	Beta-galactosidase	CAZyme	442227	445193	-	GH2
MGYG000001378_00301	Rhamnogalacturonan endolyase YesW	CAZyme	445195	447117	-	PL11\| CBM2\| PL11_1
MGYG000001378_00302	Beta-galactosidase	CAZyme	447240	450203	-	GH2
MGYG000001378_00303	SusD-like protein	null	450234	451853	-	SusD-like_3\| SusD_RagB
MGYG000001378_00304	TonB-dependent receptor SusC	TC	451868	455023	-	1.B.14.6.1
MGYG000001378_00305	hypothetical protein	CAZyme	455134	456096	-	CE4\| CE0
MGYG000001378_00306	hypothetical protein	null	456112	457626	-	Lipase_GDSL_2
MGYG000001378_00307	Beta-galactosidase	CAZyme	457875	459929	+	GH2
MGYG000001378_00308	hypothetical protein	CAZyme	459971	461554	+	GH28
MGYG000001378_00309	Beta-galactosidase	CAZyme	461705	464680	-	GH2
MGYG000001378_00310	hypothetical protein	CAZyme	464716	465837	-	GH105
MGYG000001378_00311	Rhamnogalacturonan endolyase YesW	CAZyme	466068	467984	+	PL11\| CBM2\| CBM35\| PL11_1
Protein ID	Protein Name	Type	Start	End	Strand	Signature