logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001378_11|CGC4

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001378_04519
Sodium-dependent dicarboxylate transporter SdcS
TC 176378 177892 - 2.A.47.1.12
MGYG000001378_04520
ECF RNA polymerase sigma factor SigL
TF 178081 178671 + GerE
MGYG000001378_04521
hypothetical protein
STP 178743 179756 + FecR
MGYG000001378_04522
TonB-dependent receptor SusC
TC 180024 183389 + 1.B.14.6.1
MGYG000001378_04523
hypothetical protein
null 183400 185055 + SusD-like_3| SusD_RagB
MGYG000001378_04524
hypothetical protein
CAZyme 185087 186085 + GH43_18
MGYG000001378_04525
hypothetical protein
null 186112 188160 + DUF5125
MGYG000001378_04526
Beta-galactosidase BgaA
CAZyme 188296 190407 + GH42
MGYG000001378_04527
hypothetical protein
CAZyme 190534 191628 + GH5_13| GH5
MGYG000001378_04528
Retaining alpha-galactosidase
CAZyme 191744 193738 + GH97
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location