logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001420_1|CGC13

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Created with SnapCAZymeTFTC915566917212918859920505922152923798925445927091928738930384

Gene composition table

Protein IDProtein NameTypeStartEndStrandSignature
MGYG000001420_00713
hypothetical protein
CAZyme 915566 917245 + GH28
MGYG000001420_00714
hypothetical protein
CAZyme 917254 919110 + PL1| CE8| PL1_2
MGYG000001420_00715
hypothetical protein
CAZyme 919135 920757 + CE12| CE8
MGYG000001420_00716
Sensor histidine kinase RcsC
TF 920806 925185 + HTH_AraC+HTH_AraC
MGYG000001420_00717
Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme 925182 926411 + GH105
MGYG000001420_00718
TonB-dependent receptor SusC
TC 926877 930113 + 1.B.14.6.1
MGYG000001420_00719
hypothetical protein
TC 930142 932031 + 8.A.46.1.3
Protein IDProtein NameTypeStartEndStrandSignature
Showing 1 to 7 of 7 entries

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location

1,904 Pageviews
Mar. 16th - Apr. 16th