dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01462
Location and strand information: 1644396 - 1645040 (+)
Family: 3.A.1.12.5
Protein type: TC
Protein description: Lipoprotein-releasing system ATP-binding protein LolD

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01463
Location and strand information: 1645076 - 1646281 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01464
Location and strand information: 1646338 - 1648227 (+)
Family: GT51
Protein type: CAZyme
Protein description: Monofunctional biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 7.421
Protein molecular weight: 71965.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01465
Location and strand information: 1648231 - 1652328 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01466
Location and strand information: 1652888 - 1656031 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01467
Location and strand information: 1656050 - 1657750 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01468
Location and strand information: 1657769 - 1659154 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01469
Location and strand information: 1659185 - 1661509 (+)
Family: GH10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3709
Protein molecular weight: 86177.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01470
Location and strand information: 1661752 - 1663479 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6397
Protein molecular weight: 65086.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01471
Location and strand information: 1663497 - 1663832 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01472
Location and strand information: 1664041 - 1665537 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01473
Location and strand information: 1665608 - 1668313 (+)
Family: GH10|GH43_12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7084
Protein molecular weight: 100175.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01474
Location and strand information: 1668346 - 1669323 (+)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.6882
Protein molecular weight: 37126.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01475
Location and strand information: 1669339 - 1670319 (+)
Family: null
Protein type: null
Protein description: scyllo-inositol 2-dehydrogenase (NADP(+)) IolU

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01476
Location and strand information: 1670348 - 1672381 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.5037
Protein molecular weight: 77783.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01477
Location and strand information: 1672890 - 1676990 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01478
Location and strand information: 1677068 - 1680292 (-)
Family: CE1|GH95|CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6232
Protein molecular weight: 119737.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01479
Location and strand information: 1680327 - 1681208 (-)
Family: CE1
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 6.8869
Protein molecular weight: 33583.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01480
Location and strand information: 1681307 - 1683280 (-)
Family: GH43|GH5|GH5_21
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6825
Protein molecular weight: 72802.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01481
Location and strand information: 1683311 - 1685686 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6963
Protein molecular weight: 90618.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01482
Location and strand information: 1685833 - 1687038 (-)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.7743
Protein molecular weight: 46046.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC27
Gene ID: MGYG000001422_01483
Location and strand information: 1687199 - 1689352 (-)
Family: CBM4|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7114
Protein molecular weight: 78980.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001422_01462	Lipoprotein-releasing system ATP-binding protein LolD	TC	1644396	1645040	+	3.A.1.12.5
MGYG000001422_01463	hypothetical protein	null	1645076	1646281	+	No domain
MGYG000001422_01464	Monofunctional biosynthetic peptidoglycan transglycosylase	CAZyme	1646338	1648227	+	GT51
MGYG000001422_01465	Sensor histidine kinase RcsC	TF	1648231	1652328	-	HTH_AraC+HTH_AraC
MGYG000001422_01466	TonB-dependent receptor SusC	TC	1652888	1656031	+	1.B.14.6.1
MGYG000001422_01467	SusD-like protein	null	1656050	1657750	+	SusD-like_3\| SusD_RagB
MGYG000001422_01468	hypothetical protein	null	1657769	1659154	+	SGBP_B_XBD
MGYG000001422_01469	hypothetical protein	CAZyme	1659185	1661509	+	GH10\| CBM22
MGYG000001422_01470	hypothetical protein	CAZyme	1661752	1663479	+	GH35
MGYG000001422_01471	hypothetical protein	null	1663497	1663832	+	No domain
MGYG000001422_01472	Inner membrane symporter YicJ	TC	1664041	1665537	+	2.A.2.3.4
MGYG000001422_01473	hypothetical protein	CAZyme	1665608	1668313	+	GH10\| GH43_12
MGYG000001422_01474	Xylosidase/arabinosidase	CAZyme	1668346	1669323	+	GH43\| GH43_1
MGYG000001422_01475	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	null	1669339	1670319	+	GFO_IDH_MocA
MGYG000001422_01476	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	1670348	1672381	+	GH67
MGYG000001422_01477	Sensor histidine kinase RcsC	TF	1672890	1676990	+	HTH_AraC
MGYG000001422_01478	hypothetical protein	CAZyme	1677068	1680292	-	CE1\| GH95\| CE6
MGYG000001422_01479	Endo-1,4-beta-xylanase Z	CAZyme	1680327	1681208	-	CE1
MGYG000001422_01480	hypothetical protein	CAZyme	1681307	1683280	-	GH43\| GH5\| GH5_21
MGYG000001422_01481	hypothetical protein	CAZyme	1683311	1685686	-	GH146
MGYG000001422_01482	Endo-1,4-beta-xylanase A	CAZyme	1685833	1687038	-	GH10
MGYG000001422_01483	hypothetical protein	CAZyme	1687199	1689352	-	CBM4\| GH10
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001422_01464	GT51_e16
MGYG000001422_01469
MGYG000001422_01470	GH35_e24
MGYG000001422_01473	GH10_e61
MGYG000001422_01474	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000001422_01476	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000001422_01478	CE6_e7\|CE1_e61\|3.1.1.72	xylan
MGYG000001422_01479	CE1_e69
MGYG000001422_01480	GH5_e31\|GH43_e200\|3.2.1.8	xylan
MGYG000001422_01481
MGYG000001422_01482	GH10_e61
MGYG000001422_01483	GH10_e9\|CBM4_e10\|3.2.1.8	xylan