dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02344
Location and strand information: 906359 - 908176 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3344
Protein molecular weight: 69176.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02345
Location and strand information: 908707 - 911589 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02346
Location and strand information: 911744 - 915067 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02347
Location and strand information: 915090 - 916802 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02348
Location and strand information: 916852 - 919923 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.9261
Protein molecular weight: 116341.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02349
Location and strand information: 919928 - 920839 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02350
Location and strand information: 920869 - 923439 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6601
Protein molecular weight: 98398.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02351
Location and strand information: 923455 - 926298 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.4028
Protein molecular weight: 108383.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02352
Location and strand information: 926475 - 926843 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02353
Location and strand information: 926993 - 928633 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_2|CGC20
Gene ID: MGYG000001422_02354
Location and strand information: 928852 - 930726 (+)
Family: 1.C.39.4.5
Protein type: TC
Protein description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001422_02344	Beta-galactosidase	CAZyme	906359	908176	-	GH2
MGYG000001422_02345	HTH-type transcriptional activator RhaR	TF	908707	911589	+	HTH_AraC
MGYG000001422_02346	TonB-dependent receptor SusC	TC	911744	915067	+	1.B.14.6.1
MGYG000001422_02347	hypothetical protein	null	915090	916802	+	SusD-like_3\| SusD_RagB
MGYG000001422_02348	Beta-galactosidase	CAZyme	916852	919923	+	GH2
MGYG000001422_02349	hypothetical protein	null	919928	920839	+	BD-FAE
MGYG000001422_02350	hypothetical protein	CAZyme	920869	923439	+	GH115
MGYG000001422_02351	Beta-galactosidase	CAZyme	923455	926298	+	GH2
MGYG000001422_02352	hypothetical protein	null	926475	926843	-	DUF3244
MGYG000001422_02353	hypothetical protein	null	926993	928633	-	No domain
MGYG000001422_02354	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	TC	928852	930726	+	1.C.39.4.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature