dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02701
Location and strand information: 2870117 - 2871676 (-)
Family: GH18|CBM12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5233
Protein molecular weight: 55343.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02702
Location and strand information: 2872137 - 2873564 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02703
Location and strand information: 2873561 - 2875336 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02704
Location and strand information: 2875508 - 2877145 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02705
Location and strand information: 2877195 - 2878067 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02706
Location and strand information: 2878080 - 2879036 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02707
Location and strand information: 2879131 - 2879403 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02708
Location and strand information: 2879980 - 2883051 (-)
Family: GH43|GH43_26|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4841
Protein molecular weight: 111048.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02709
Location and strand information: 2883611 - 2884612 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02710
Location and strand information: 2884593 - 2886584 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02711
Location and strand information: 2886581 - 2887810 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02712
Location and strand information: 2888048 - 2889127 (+)
Family: 3.A.1.2.5
Protein type: TC
Protein description: Multiple sugar-binding periplasmic protein SbpA

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02713
Location and strand information: 2889239 - 2890777 (+)
Family: 3.A.1.2.5
Protein type: TC
Protein description: Xylose import ATP-binding protein XylG

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02714
Location and strand information: 2890752 - 2891915 (+)
Family: 3.A.1.2.5
Protein type: TC
Protein description: Xylose transport system permease protein XylH

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02715
Location and strand information: 2892121 - 2893071 (-)
Family: null
Protein type: null
Protein description: Penicillin-binding protein 4*

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02716
Location and strand information: 2893764 - 2895224 (+)
Family: null
Protein type: null
Protein description: RNA-splicing ligase RtcB

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02717
Location and strand information: 2895221 - 2896522 (+)
Family: 9.A.62.1.1
Protein type: TC
Protein description: putative ATPase YjoB

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02719
Location and strand information: 2896781 - 2898172 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02720
Location and strand information: 2898176 - 2899129 (-)
Family: null
Protein type: null
Protein description: Pyrimidine-specific ribonucleoside hydrolase RihA

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02721
Location and strand information: 2899376 - 2900314 (-)
Family: 3.A.1.2.18
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02722
Location and strand information: 2900311 - 2901357 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02723
Location and strand information: 2901350 - 2902912 (-)
Family: 3.A.1.2.17
Protein type: TC
Protein description: Galactose/methyl galactoside import ATP-binding protein MglA

Gene clsuter ID: MGYG000001451_1|CGC42
Gene ID: MGYG000001451_02724
Location and strand information: 2903062 - 2904189 (-)
Family: 3.A.1.2.10
Protein type: TC
Protein description: Membrane lipoprotein TmpC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001451_02701	hypothetical protein	CAZyme	2870117	2871676	-	GH18\| CBM12
MGYG000001451_02702	Regulator of RpoS	TF	2872137	2873564	-	HTH_AraC
MGYG000001451_02703	hypothetical protein	TC	2873561	2875336	-	9.B.33.1.1
MGYG000001451_02704	Lipoprotein LipO	TC	2875508	2877145	-	3.A.1.1.9
MGYG000001451_02705	Lactose transport system permease protein LacG	TC	2877195	2878067	-	3.A.1.1.29
MGYG000001451_02706	putative multiple-sugar transport system permease YteP	TC	2878080	2879036	-	3.A.1.1.10
MGYG000001451_02707	hypothetical protein	null	2879131	2879403	-	No domain
MGYG000001451_02708	hypothetical protein	CAZyme	2879980	2883051	-	GH43\| GH43_26\| CBM35
MGYG000001451_02709	hypothetical protein	TC	2883611	2884612	+	3.A.1.2.20
MGYG000001451_02710	hypothetical protein	TC	2884593	2886584	+	8.A.59.2.1
MGYG000001451_02711	Regulator of RpoS	TF	2886581	2887810	+	HTH_AraC+HTH_AraC
MGYG000001451_02712	Multiple sugar-binding periplasmic protein SbpA	TC	2888048	2889127	+	3.A.1.2.5
MGYG000001451_02713	Xylose import ATP-binding protein XylG	TC	2889239	2890777	+	3.A.1.2.5
MGYG000001451_02714	Xylose transport system permease protein XylH	TC	2890752	2891915	+	3.A.1.2.5
MGYG000001451_02715	Penicillin-binding protein 4*	null	2892121	2893071	-	Beta-lactamase
MGYG000001451_02716	RNA-splicing ligase RtcB	null	2893764	2895224	+	RtcB
MGYG000001451_02717	putative ATPase YjoB	TC	2895221	2896522	+	9.A.62.1.1
MGYG000001451_02719	hypothetical protein	null	2896781	2898172	-	ADP_ribosyl_GH
MGYG000001451_02720	Pyrimidine-specific ribonucleoside hydrolase RihA	null	2898176	2899129	-	IU_nuc_hydro
MGYG000001451_02721	hypothetical protein	TC	2899376	2900314	-	3.A.1.2.18
MGYG000001451_02722	hypothetical protein	null	2900311	2901357	-	BPD_transp_2
MGYG000001451_02723	Galactose/methyl galactoside import ATP-binding protein MglA	TC	2901350	2902912	-	3.A.1.2.17
MGYG000001451_02724	Membrane lipoprotein TmpC	TC	2903062	2904189	-	3.A.1.2.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature