dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03228
Location and strand information: 3387222 - 3388001 (+)
Family: 3.A.1.3.11
Protein type: TC
Protein description: Lysine/arginine/ornithine-binding periplasmic protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03229
Location and strand information: 3388092 - 3388781 (+)
Family: 3.A.1.3.11
Protein type: TC
Protein description: Histidine transport system permease protein HisQ

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03230
Location and strand information: 3388778 - 3389476 (+)
Family: 3.A.1.3.11
Protein type: TC
Protein description: Octopine transport system permease protein OccM

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03231
Location and strand information: 3389534 - 3390298 (+)
Family: 3.A.1.3.11
Protein type: TC
Protein description: Histidine transport ATP-binding protein HisP

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03232
Location and strand information: 3390302 - 3391261 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional regulator CdhR

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03233
Location and strand information: 3391280 - 3393793 (-)
Family: 9.B.34.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03234
Location and strand information: 3393934 - 3394131 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03235
Location and strand information: 3394076 - 3394765 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03236
Location and strand information: 3394876 - 3395577 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03237
Location and strand information: 3395577 - 3396344 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03238
Location and strand information: 3396341 - 3397612 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03239
Location and strand information: 3397609 - 3398532 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03240
Location and strand information: 3398674 - 3399795 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03241
Location and strand information: 3400077 - 3400391 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03242
Location and strand information: 3400407 - 3401171 (-)
Family: 3.A.1.9.1
Protein type: TC
Protein description: Phosphate-import permease protein PhnE

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03243
Location and strand information: 3401174 - 3401995 (-)
Family: 3.A.1.9.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03244
Location and strand information: 3401989 - 3402789 (-)
Family: 3.A.1.24.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03245
Location and strand information: 3402786 - 3403634 (-)
Family: 3.A.1.9.1
Protein type: TC
Protein description: putative ABC transporter phosphite binding protein PhnD1

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03246
Location and strand information: 3403781 - 3405709 (-)
Family: GH23
Protein type: CAZyme
Protein description: Soluble lytic murein transglycosylase
Protein isoelectric point: 9.6499
Protein molecular weight: 73752.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001457_1|CGC28
Gene ID: MGYG000001457_03247
Location and strand information: 3405927 - 3407846 (+)
Family: 3.A.1.120.6
Protein type: TC
Protein description: ABC transporter ATP-binding protein uup

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001457_03228	Lysine/arginine/ornithine-binding periplasmic protein	TC	3387222	3388001	+	3.A.1.3.11
MGYG000001457_03229	Histidine transport system permease protein HisQ	TC	3388092	3388781	+	3.A.1.3.11
MGYG000001457_03230	Octopine transport system permease protein OccM	TC	3388778	3389476	+	3.A.1.3.11
MGYG000001457_03231	Histidine transport ATP-binding protein HisP	TC	3389534	3390298	+	3.A.1.3.11
MGYG000001457_03232	HTH-type transcriptional regulator CdhR	TF	3390302	3391261	+	HTH_AraC+HTH_AraC
MGYG000001457_03233	hypothetical protein	TC	3391280	3393793	-	9.B.34.1.3
MGYG000001457_03234	hypothetical protein	null	3393934	3394131	-	No domain
MGYG000001457_03235	hypothetical protein	null	3394076	3394765	-	No domain
MGYG000001457_03236	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	3394876	3395577	-	3.A.1.4.8
MGYG000001457_03237	Lipopolysaccharide export system ATP-binding protein LptB	TC	3395577	3396344	-	3.A.1.4.8
MGYG000001457_03238	hypothetical protein	TC	3396341	3397612	-	3.A.1.4.8
MGYG000001457_03239	High-affinity branched-chain amino acid transport system permease protein LivH	TC	3397609	3398532	-	3.A.1.4.8
MGYG000001457_03240	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein	TC	3398674	3399795	-	3.A.1.4.8
MGYG000001457_03241	hypothetical protein	null	3400077	3400391	+	DUF2288
MGYG000001457_03242	Phosphate-import permease protein PhnE	TC	3400407	3401171	-	3.A.1.9.1
MGYG000001457_03243	hypothetical protein	TC	3401174	3401995	-	3.A.1.9.1
MGYG000001457_03244	Vitamin B12 import ATP-binding protein BtuD	TC	3401989	3402789	-	3.A.1.24.2
MGYG000001457_03245	putative ABC transporter phosphite binding protein PhnD1	TC	3402786	3403634	-	3.A.1.9.1
MGYG000001457_03246	Soluble lytic murein transglycosylase	CAZyme	3403781	3405709	-	GH23
MGYG000001457_03247	ABC transporter ATP-binding protein uup	TC	3405927	3407846	+	3.A.1.120.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature