dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02989
Location and strand information: 140919 - 141803 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02990
Location and strand information: 142099 - 143073 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02991
Location and strand information: 143183 - 144736 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02992
Location and strand information: 144739 - 145884 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.0675
Protein molecular weight: 43750.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02993
Location and strand information: 145877 - 147235 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.654
Protein molecular weight: 49691.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02994
Location and strand information: 147248 - 148183 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02995
Location and strand information: 148229 - 149278 (+)
Family: CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1533
Protein molecular weight: 39151.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02996
Location and strand information: 149238 - 150878 (+)
Family: GH43|GH43_11
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 5.8817
Protein molecular weight: 61937.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02997
Location and strand information: 150990 - 151514 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001526_15|CGC5
Gene ID: MGYG000001526_02998
Location and strand information: 151532 - 153166 (+)
Family: 2.A.1.3.33
Protein type: TC
Protein description: Multidrug resistance protein 3

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001526_02989	L-arabinose transport system permease protein AraQ	TC	140919	141803	-	3.A.1.1.29
MGYG000001526_02990	putative multiple-sugar transport system permease YteP	TC	142099	143073	+	3.A.1.1.10
MGYG000001526_02991	Lipoprotein LipO	TC	143183	144736	+	3.A.1.1.9
MGYG000001526_02992	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	144739	145884	+	GH105
MGYG000001526_02993	hypothetical protein	CAZyme	145877	147235	+	GH28
MGYG000001526_02994	hypothetical protein	null	147248	148183	+	AXE1
MGYG000001526_02995	hypothetical protein	CAZyme	148229	149278	+	CE8
MGYG000001526_02996	Beta-xylosidase	CAZyme	149238	150878	+	GH43\| GH43_11
MGYG000001526_02997	hypothetical protein	TF	150990	151514	+	MarR
MGYG000001526_02998	Multidrug resistance protein 3	TC	151532	153166	+	2.A.1.3.33
Protein ID	Protein Name	Type	Start	End	Strand	Signature