dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01118
Location and strand information: 516358 - 518583 (-)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 4.8471
Protein molecular weight: 84517.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01119
Location and strand information: 518615 - 519661 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.8951
Protein molecular weight: 39630.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01120
Location and strand information: 519764 - 520609 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01121
Location and strand information: 520613 - 521503 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01122
Location and strand information: 521606 - 522964 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01123
Location and strand information: 523193 - 525022 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01124
Location and strand information: 525016 - 526518 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01125
Location and strand information: 526503 - 527465 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001531_6|CGC7
Gene ID: MGYG000001531_01126
Location and strand information: 527661 - 529064 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galacturonidase
Protein isoelectric point: 4.6189
Protein molecular weight: 52587.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001531_01118	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	516358	518583	-	GH112
MGYG000001531_01119	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	518615	519661	-	GH105
MGYG000001531_01120	L-arabinose transport system permease protein AraQ	TC	519764	520609	-	3.A.1.1.11
MGYG000001531_01121	Lactose transport system permease protein LacF	TC	520613	521503	-	3.A.1.1.11
MGYG000001531_01122	Putative ABC transporter substrate-binding protein YesO	STP	521606	522964	-	SBP_bac_1
MGYG000001531_01123	hypothetical protein	TC	523193	525022	+	9.B.33.1.1
MGYG000001531_01124	Chemotaxis response regulator protein-glutamate methylesterase	TF	525016	526518	+	HTH_AraC+HTH_AraC
MGYG000001531_01125	HTH-type transcriptional activator RhaR	TF	526503	527465	-	HTH_AraC+HTH_AraC
MGYG000001531_01126	Alpha-galacturonidase	CAZyme	527661	529064	+	GH4
Protein ID	Protein Name	Type	Start	End	Strand	Signature