dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03239
Location and strand information: 206169 - 207185 (+)
Family: GH130
Protein type: CAZyme
Protein description: Beta-1,4-mannooligosaccharide phosphorylase
Protein isoelectric point: 4.5174
Protein molecular weight: 38496.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03240
Location and strand information: 207377 - 208690 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03241
Location and strand information: 208808 - 209683 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03242
Location and strand information: 209702 - 210532 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03243
Location and strand information: 210572 - 212377 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03244
Location and strand information: 212406 - 213956 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03245
Location and strand information: 214022 - 216352 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.8415
Protein molecular weight: 83167.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03246
Location and strand information: 216834 - 217958 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated glucuronyl hydrolase
Protein isoelectric point: 4.8669
Protein molecular weight: 43279.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03247
Location and strand information: 217948 - 220122 (+)
Family: PL12
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 5.0802
Protein molecular weight: 82694.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03248
Location and strand information: 220204 - 221919 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03249
Location and strand information: 221919 - 223505 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03250
Location and strand information: 223706 - 224638 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03251
Location and strand information: 224651 - 225487 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03252
Location and strand information: 225644 - 227032 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03253
Location and strand information: 227181 - 229541 (+)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4198
Protein molecular weight: 88115.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_37|CGC2
Gene ID: MGYG000001542_03254
Location and strand information: 229564 - 230823 (+)
Family: GH29|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6285
Protein molecular weight: 47739.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001542_03239	GH130_e4
MGYG000001542_03245	GH3_e39\|3.2.1.21	beta-glucan
MGYG000001542_03246	GH88_e27\|3.2.1.-	hostglycan
MGYG000001542_03247	PL12_e4
MGYG000001542_03253	GH95_e22\|3.2.1.63	xyloglucan\|hostglycan
MGYG000001542_03254	GH29_e19\|CBM32_e54\|3.2.1.51\|3.2.1.111	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001542_03239	Beta-1,4-mannooligosaccharide phosphorylase	CAZyme	206169	207185	+	GH130
MGYG000001542_03240	hypothetical protein	STP	207377	208690	+	SBP_bac_1
MGYG000001542_03241	Lactose transport system permease protein LacF	TC	208808	209683	+	3.A.1.1.20
MGYG000001542_03242	L-arabinose transport system permease protein AraQ	TC	209702	210532	+	3.A.1.1.18
MGYG000001542_03243	hypothetical protein	TC	210572	212377	+	8.A.59.2.1
MGYG000001542_03244	Regulator of RpoS	TF	212406	213956	+	HTH_AraC+HTH_AraC
MGYG000001542_03245	Beta-glucosidase BoGH3B	CAZyme	214022	216352	+	GH3
MGYG000001542_03246	Unsaturated glucuronyl hydrolase	CAZyme	216834	217958	+	GH88
MGYG000001542_03247	Heparin-sulfate lyase	CAZyme	217948	220122	+	PL12
MGYG000001542_03248	hypothetical protein	TC	220204	221919	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature