dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04771
Location and strand information: 522532 - 527235 (-)
Family: CBM9|GH39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.403
Protein molecular weight: 171371.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04772
Location and strand information: 527297 - 529033 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04773
Location and strand information: 529119 - 529484 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04774
Location and strand information: 529489 - 531087 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04775
Location and strand information: 531152 - 532033 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04776
Location and strand information: 532038 - 532952 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04777
Location and strand information: 533155 - 535467 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04778
Location and strand information: 535651 - 536451 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04779
Location and strand information: 536448 - 537503 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.7555
Protein molecular weight: 39225.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04780
Location and strand information: 537733 - 538623 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04781
Location and strand information: 538705 - 543654 (-)
Family: CBM9|GH39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6057
Protein molecular weight: 181172.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04782
Location and strand information: 543708 - 544808 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04783
Location and strand information: 544903 - 546321 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04784
Location and strand information: 546438 - 547310 (-)
Family: 3.A.1.1.39
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04785
Location and strand information: 547307 - 548224 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04786
Location and strand information: 548357 - 550132 (-)
Family: dCache_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04787
Location and strand information: 550140 - 551771 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04788
Location and strand information: 552001 - 554277 (-)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 5.0367
Protein molecular weight: 84116.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04789
Location and strand information: 554319 - 555689 (-)
Family: 2.A.2.3.3
Protein type: TC
Protein description: Isoprimeverose transporter

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04790
Location and strand information: 555777 - 557114 (-)
Family: GH30_2|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8327
Protein molecular weight: 51935.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04791
Location and strand information: 557239 - 558168 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04792
Location and strand information: 558318 - 559190 (+)
Family: 2.A.115.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04793
Location and strand information: 559292 - 560827 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04794
Location and strand information: 560864 - 561619 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04795
Location and strand information: 561594 - 563351 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04796
Location and strand information: 563484 - 564995 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04797
Location and strand information: 565080 - 566009 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04798
Location and strand information: 566023 - 566964 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04799
Location and strand information: 567218 - 572200 (-)
Family: GH85
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4554
Protein molecular weight: 181147.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04800
Location and strand information: 572658 - 575870 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.427
Protein molecular weight: 121548.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_44|CGC11
Gene ID: MGYG000001542_04801
Location and strand information: 575896 - 578208 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.755
Protein molecular weight: 83330.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001542_04771
MGYG000001542_04779	GH105_e31
MGYG000001542_04781
MGYG000001542_04788	GH3_e93\|3.2.1.45\|3.2.1.21\|3.2.1.-	hostglycan\|beta-glucan
MGYG000001542_04790	GH30_e36\|3.2.1.37	xylan
MGYG000001542_04799	GH85_e1
MGYG000001542_04800	GH38_e14\|3.2.1.24	hostglycan
MGYG000001542_04801	GH3_e22

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001542_04771	hypothetical protein	CAZyme	522532	527235	-	CBM9\| GH39
MGYG000001542_04772	hypothetical protein	null	527297	529033	-	No domain
MGYG000001542_04773	hypothetical protein	null	529119	529484	-	No domain
MGYG000001542_04774	hypothetical protein	TC	529489	531087	-	3.A.1.1.10
MGYG000001542_04775	Lactose transport system permease protein LacG	TC	531152	532033	-	3.A.1.1.29
MGYG000001542_04776	putative multiple-sugar transport system permease YteP	TC	532038	532952	-	3.A.1.1.10
MGYG000001542_04777	HTH-type transcriptional activator RhaR	TF	533155	535467	-	HTH_AraC
MGYG000001542_04778	hypothetical protein	null	535651	536451	-	Polysacc_deac_1
MGYG000001542_04779	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	536448	537503	-	GH105
MGYG000001542_04780	HTH-type transcriptional activator RhaR	TF	537733	538623	+	HTH_AraC
MGYG000001542_04781	hypothetical protein	CAZyme	538705	543654	-	CBM9\| GH39
MGYG000001542_04782	hypothetical protein	null	543708	544808	-	No domain
MGYG000001542_04783	hypothetical protein	STP	544903	546321	-	SBP_bac_1
MGYG000001542_04784	L-arabinose transport system permease protein AraQ	TC	546438	547310	-	3.A.1.1.39
MGYG000001542_04785	putative multiple-sugar transport system permease YteP	TC	547307	548224	-	3.A.1.1.36
MGYG000001542_04786	hypothetical protein	STP	548357	550132	-	dCache_1
MGYG000001542_04787	Regulator of RpoS	TF	550140	551771	-	HTH_AraC+HTH_AraC
MGYG000001542_04788	Thermostable beta-glucosidase B	CAZyme	552001	554277	-	GH3
MGYG000001542_04789	Isoprimeverose transporter	TC	554319	555689	-	2.A.2.3.3
MGYG000001542_04790	hypothetical protein	CAZyme	555777	557114	-	GH30_2\| GH30
MGYG000001542_04791	HTH-type transcriptional activator RhaS	TF	557239	558168	+	HTH_AraC+HTH_AraC
MGYG000001542_04792	hypothetical protein	TC	558318	559190	+	2.A.115.1.1
MGYG000001542_04793	hypothetical protein	STP	559292	560827	-	SBP_bac_1
MGYG000001542_04794	putative response regulatory protein	TF	560864	561619	-	HTH_AraC+HTH_AraC
MGYG000001542_04795	hypothetical protein	TC	561594	563351	-	9.B.33.1.1
MGYG000001542_04796	hypothetical protein	STP	563484	564995	-	SBP_bac_1
MGYG000001542_04797	L-arabinose transport system permease protein AraQ	TC	565080	566009	-	3.A.1.1.29
MGYG000001542_04798	putative multiple-sugar transport system permease YteP	TC	566023	566964	-	3.A.1.1.10
MGYG000001542_04799	hypothetical protein	CAZyme	567218	572200	-	GH85
MGYG000001542_04800	hypothetical protein	CAZyme	572658	575870	-	GH38
MGYG000001542_04801	Beta-glucosidase BoGH3B	CAZyme	575896	578208	-	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature