dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00902
Location and strand information: 952307 - 958474 (+)
Family: GH13|CBM34|CBM48|CBM20|GH13_39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8018
Protein molecular weight: 224540.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00903
Location and strand information: 958742 - 959950 (+)
Family: 2.A.1.2.65
Protein type: TC
Protein description: Inner membrane transport protein YdhP

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00904
Location and strand information: 959995 - 960597 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00905
Location and strand information: 960758 - 962896 (-)
Family: GH52
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.582
Protein molecular weight: 79309.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00906
Location and strand information: 963117 - 964010 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00907
Location and strand information: 964069 - 965871 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00908
Location and strand information: 965846 - 966634 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00909
Location and strand information: 966817 - 968154 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00910
Location and strand information: 968221 - 969090 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001548_4|CGC14
Gene ID: MGYG000001548_00911
Location and strand information: 969109 - 969993 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001548_00902	hypothetical protein	CAZyme	952307	958474	+	GH13\| CBM34\| CBM48\| CBM20\| GH13_39
MGYG000001548_00903	Inner membrane transport protein YdhP	TC	958742	959950	+	2.A.1.2.65
MGYG000001548_00904	hypothetical protein	null	959995	960597	+	Mrr_cat
MGYG000001548_00905	Beta-xylosidase	CAZyme	960758	962896	-	GH52
MGYG000001548_00906	Arabinose operon regulatory protein	TF	963117	964010	+	HTH_AraC+HTH_AraC
MGYG000001548_00907	hypothetical protein	TC	964069	965871	+	8.A.59.2.1
MGYG000001548_00908	putative response regulatory protein	TF	965846	966634	+	HTH_AraC+HTH_AraC
MGYG000001548_00909	Multiple sugar-binding protein	STP	966817	968154	+	SBP_bac_1
MGYG000001548_00910	Lactose transport system permease protein LacF	TC	968221	969090	+	3.A.1.1.20
MGYG000001548_00911	Trehalose transport system permease protein SugB	TC	969109	969993	+	3.A.1.1.18
Protein ID	Protein Name	Type	Start	End	Strand	Signature