dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02250
Location and strand information: 60683 - 63724 (+)
Family: GH2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.006
Protein molecular weight: 116478.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02251
Location and strand information: 63714 - 65900 (+)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02252
Location and strand information: 66101 - 67069 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02253
Location and strand information: 67085 - 67987 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02254
Location and strand information: 68013 - 69602 (+)
Family: null
Protein type: null
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02255
Location and strand information: 69718 - 72354 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0978
Protein molecular weight: 100830.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02256
Location and strand information: 72370 - 75513 (+)
Family: CBM35|PL11_1|PL11|CE12|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8511
Protein molecular weight: 118835.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02257
Location and strand information: 75517 - 76566 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.7541
Protein molecular weight: 39680.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02258
Location and strand information: 76563 - 77372 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001571_16|CGC3
Gene ID: MGYG000001571_02259
Location and strand information: 77374 - 77937 (-)
Family: 2.A.107.1.2
Protein type: TC
Protein description: putative manganese efflux pump MntP

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001571_02250	hypothetical protein	CAZyme	60683	63724	+	GH2
MGYG000001571_02251	hypothetical protein	TF	63714	65900	+	HTH_AraC
MGYG000001571_02252	putative multiple-sugar transport system permease YteP	TC	66101	67069	+	3.A.1.1.10
MGYG000001571_02253	L-arabinose transport system permease protein AraQ	TC	67085	67987	+	3.A.1.1.29
MGYG000001571_02254	Lipoprotein LipO	null	68013	69602	+	SBP_bac_8
MGYG000001571_02255	hypothetical protein	CAZyme	69718	72354	+	PL26
MGYG000001571_02256	hypothetical protein	CAZyme	72370	75513	+	CBM35\| PL11_1\| PL11\| CE12\| CBM2
MGYG000001571_02257	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	75517	76566	+	GH105
MGYG000001571_02258	hypothetical protein	null	76563	77372	+	Polysacc_deac_1
MGYG000001571_02259	putative manganese efflux pump MntP	TC	77374	77937	-	2.A.107.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature