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CAZyme Gene Cluster: MGYG000001571_9|CGC1

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001571_01382
Unsaturated rhamnogalacturonyl hydrolase YesR
CAZyme 16893 17975 - GH105
MGYG000001571_01383
HTH-type transcriptional activator RhaR
TF 18145 19059 + HTH_AraC+HTH_AraC
MGYG000001571_01384
Lipoprotein LipO
TC 19167 20774 - 3.A.1.1.9
MGYG000001571_01385
Trehalose transport system permease protein SugB
TC 20818 21684 - 3.A.1.1.10
MGYG000001571_01386
putative multiple-sugar transport system permease YteP
TC 21684 22619 - 3.A.1.1.10
MGYG000001571_01387
Phosphoglycolate phosphatase
null 22639 23181 - HAD_2
MGYG000001571_01388
hypothetical protein
CAZyme 23313 26423 - GH38
MGYG000001571_01389
hypothetical protein
CAZyme 26538 29681 - GH38
MGYG000001571_01390
L-arabinose transport system permease protein AraQ
TC 29760 30614 - 3.A.1.1.11
MGYG000001571_01391
L-arabinose transport system permease protein AraP
TC 30621 31550 - 3.A.1.1.11
MGYG000001571_01392
Putative ABC transporter substrate-binding protein YesO
STP 31577 32923 - SBP_bac_1
MGYG000001571_01393
hypothetical protein
TC 33107 34867 + 8.A.59.2.1
MGYG000001571_01394
Regulator of RpoS
TF 34869 36407 + HTH_AraC
MGYG000001571_01395
Unsaturated rhamnogalacturonyl hydrolase YesR
CAZyme 36410 37528 + GH105
MGYG000001571_01396
HTH-type transcriptional activator RhaR
TF 37557 38423 - HTH_AraC+HTH_AraC
MGYG000001571_01397
Alpha-galacturonidase
CAZyme 38574 39971 + GH4
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001571_01382 GH105_e40
MGYG000001571_01388 GH38_e12|3.2.1.24 hostglycan
MGYG000001571_01389 GH38_e14|3.2.1.24 hostglycan
MGYG000001571_01395 GH105_e15
MGYG000001571_01397 GH4_e7

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location