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CAZyme Gene Cluster: MGYG000001661_1|CGC2

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001661_00028
Beta-galactosidase
CAZyme 34339 37362 - GH2
MGYG000001661_00029
SusD-like protein
null 37359 38921 - SusD-like_3| SusD_RagB
MGYG000001661_00030
TonB-dependent receptor SusC
null 38952 39680 - No domain
MGYG000001661_00031
TonB-dependent receptor SusC
TC 39656 42040 - 1.B.14.6.1
MGYG000001661_00032
hypothetical protein
null 42330 43241 + SASA
MGYG000001661_00033
Beta-galactosidase
CAZyme 43356 46232 - GH2
MGYG000001661_00034
hypothetical protein
null 46242 47018 - No domain
MGYG000001661_00035
hypothetical protein
CAZyme 47046 48326 - CE12
MGYG000001661_00036
hypothetical protein
null 48340 50040 - Mfa_like_1
MGYG000001661_00037
Rhamnogalacturonan endolyase YesW
CAZyme 50192 52207 + PL11| PL11_1| CBM35
MGYG000001661_00038
hypothetical protein
CAZyme 52422 53993 + PL9_1| PL9
MGYG000001661_00039
hypothetical protein
null 54023 54445 + No domain
MGYG000001661_00040
Sensor histidine kinase RcsC
TF 54431 58804 - HTH_AraC
MGYG000001661_00041
hypothetical protein
CAZyme 58863 59822 - CE4| CE0
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000001661_00028 GH2_e11|3.2.1.31 beta-glucuronan
MGYG000001661_00033 GH2_e63|3.2.1.23 beta-galactan
MGYG000001661_00035 CE12_e46
MGYG000001661_00037 PL11_e0|CBM35_e56|4.2.2.23 pectin
MGYG000001661_00038 PL9_e26|4.2.2.23 pectin
MGYG000001661_00041 CE4_e36

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location