dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01274
Location and strand information: 52 - 1401 (+)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4087
Protein molecular weight: 49854.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01275
Location and strand information: 1497 - 3950 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7773
Protein molecular weight: 93078.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01276
Location and strand information: 3980 - 5356 (-)
Family: GH43|CBM6|GH43_29
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 5.6161
Protein molecular weight: 52540.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01277
Location and strand information: 5468 - 8578 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01278
Location and strand information: 8575 - 8715 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01279
Location and strand information: 8778 - 11411 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6391
Protein molecular weight: 100106.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01280
Location and strand information: 11457 - 13964 (+)
Family: GH43|GH43_29|CE1|CBM6|CE0|CBM48
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1588
Protein molecular weight: 93635.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01281
Location and strand information: 13995 - 16439 (+)
Family: CE15|GH8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9954
Protein molecular weight: 92211.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01282
Location and strand information: 16463 - 19714 (+)
Family: GH95|CBM51|CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4824
Protein molecular weight: 119752.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01283
Location and strand information: 19752 - 21341 (+)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 5.5618
Protein molecular weight: 59892.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01284
Location and strand information: 21356 - 23944 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8159
Protein molecular weight: 98789.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01285
Location and strand information: 23925 - 28016 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01286
Location and strand information: 28065 - 28523 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01287
Location and strand information: 28559 - 30535 (-)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 7.39
Protein molecular weight: 74886.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01288
Location and strand information: 30609 - 31580 (-)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.7745
Protein molecular weight: 36966.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01289
Location and strand information: 31765 - 34497 (-)
Family: 3.2.1.55|GH10|GH43_12|3.2.1.8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0967
Protein molecular weight: 100936.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01290
Location and strand information: 34519 - 36015 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01291
Location and strand information: 36060 - 37691 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01292
Location and strand information: 37737 - 39398 (-)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.451
Protein molecular weight: 62619.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01293
Location and strand information: 39693 - 41573 (-)
Family: GH10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2545
Protein molecular weight: 70087.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01294
Location and strand information: 41606 - 43021 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01295
Location and strand information: 43037 - 44722 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01296
Location and strand information: 44744 - 47893 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01297
Location and strand information: 48207 - 52289 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01298
Location and strand information: 52289 - 55138 (+)
Family: PL40
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2393
Protein molecular weight: 106763.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_9|CGC1
Gene ID: MGYG000001661_01299
Location and strand information: 55205 - 56551 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2391
Protein molecular weight: 50890.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001661_01274	hypothetical protein	CAZyme	52	1401	+	CBM32\| GH2
MGYG000001661_01275	hypothetical protein	CAZyme	1497	3950	-	GH31
MGYG000001661_01276	Arabinoxylan arabinofuranohydrolase	CAZyme	3980	5356	-	GH43\| CBM6\| GH43_29
MGYG000001661_01277	HTH-type transcriptional activator RhaR	TF	5468	8578	-	HTH_AraC
MGYG000001661_01278	hypothetical protein	null	8575	8715	-	No domain
MGYG000001661_01279	hypothetical protein	CAZyme	8778	11411	+	GH115
MGYG000001661_01280	hypothetical protein	CAZyme	11457	13964	+	GH43\| GH43_29\| CE1\| CBM6\| CE0\| CBM48
MGYG000001661_01281	hypothetical protein	CAZyme	13995	16439	+	CE15\| GH8
MGYG000001661_01282	hypothetical protein	CAZyme	16463	19714	+	GH95\| CBM51\| CE6
MGYG000001661_01283	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	19752	21341	+	GH43\| GH43_10
MGYG000001661_01284	hypothetical protein	CAZyme	21356	23944	+	GH115
MGYG000001661_01285	Sensor histidine kinase RcsC	TF	23925	28016	-	HTH_AraC+HTH_AraC
MGYG000001661_01286	hypothetical protein	null	28065	28523	+	No domain
MGYG000001661_01287	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	28559	30535	-	GH67
MGYG000001661_01288	Xylosidase/arabinosidase	CAZyme	30609	31580	-	GH43\| GH43_1
MGYG000001661_01289	hypothetical protein	CAZyme	31765	34497	-	3.2.1.55\| GH10\| GH43_12\| 3.2.1.8
MGYG000001661_01290	Inner membrane symporter YicJ	TC	34519	36015	-	2.A.2.3.4
MGYG000001661_01291	hypothetical protein	null	36060	37691	-	SASA\| SASA
MGYG000001661_01292	hypothetical protein	CAZyme	37737	39398	-	GH35
MGYG000001661_01293	hypothetical protein	CAZyme	39693	41573	-	GH10\| CBM22
MGYG000001661_01294	hypothetical protein	null	41606	43021	-	SGBP_B_XBD
MGYG000001661_01295	SusD-like protein	null	43037	44722	-	SusD-like_3\| SusD_RagB
MGYG000001661_01296	TonB-dependent receptor SusC	TC	44744	47893	-	1.B.14.6.1
MGYG000001661_01297	Sensor histidine kinase RcsC	TF	48207	52289	+	HTH_AraC
MGYG000001661_01298	hypothetical protein	CAZyme	52289	55138	+	PL40
MGYG000001661_01299	hypothetical protein	CAZyme	55205	56551	+	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001661_01274	GH2_e7
MGYG000001661_01275	GH31_e48
MGYG000001661_01276	GH43_e137\|CBM6_e17\|3.2.1.8\|3.2.1.55\|3.2.1.37	xylan
MGYG000001661_01279	GH115_e2\|3.2.1.131	xylan
MGYG000001661_01280	GH43_e167\|CE1_e61\|CBM6_e17\|3.2.1.8\|3.2.1.55\|3.2.1.37\|3.1.1.72	xylan
MGYG000001661_01281	GH8_e33\|3.2.1.156	xylan
MGYG000001661_01282	GH95_e0\|CBM51_e13\|3.2.1.63\|3.2.1.-	xylan\|pectin
MGYG000001661_01283	GH43_e221\|3.2.1.55	xylan
MGYG000001661_01284	GH115_e2\|3.2.1.131	xylan
MGYG000001661_01287	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000001661_01288	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000001661_01289	GH10_e61
MGYG000001661_01292	GH35_e24
MGYG000001661_01293
MGYG000001661_01298
MGYG000001661_01299	GH28_e66