dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01783
Location and strand information: 122736 - 124925 (+)
Family: CBM4|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3922
Protein molecular weight: 80631.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01784
Location and strand information: 125002 - 125190 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01785
Location and strand information: 126193 - 127308 (+)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.9591
Protein molecular weight: 42312.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01786
Location and strand information: 127455 - 129413 (+)
Family: GH5_21|GH43|GH5
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7484
Protein molecular weight: 72431.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01787
Location and strand information: 129636 - 130517 (+)
Family: CE1
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 6.3811
Protein molecular weight: 33590.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01788
Location and strand information: 130552 - 133776 (+)
Family: GH95|CE1|CE6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6231
Protein molecular weight: 119567.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01789
Location and strand information: 133851 - 137936 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01790
Location and strand information: 138466 - 140544 (-)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.1775
Protein molecular weight: 79400.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01791
Location and strand information: 140566 - 141549 (-)
Family: null
Protein type: null
Protein description: scyllo-inositol 2-dehydrogenase (NADP(+)) IolU

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01792
Location and strand information: 141565 - 142542 (-)
Family: GH43|GH43_1|3.2.1.37
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.6872
Protein molecular weight: 37110.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01793
Location and strand information: 142575 - 145310 (-)
Family: GH10|GH43_12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1994
Protein molecular weight: 101698.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01794
Location and strand information: 145328 - 146824 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01795
Location and strand information: 146843 - 148552 (-)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6913
Protein molecular weight: 64736.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01796
Location and strand information: 148795 - 151116 (-)
Family: GH10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2477
Protein molecular weight: 85931.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01797
Location and strand information: 151149 - 152552 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01798
Location and strand information: 152569 - 154257 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01799
Location and strand information: 154281 - 157433 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01800
Location and strand information: 157859 - 161962 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01801
Location and strand information: 161971 - 163176 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_10|CGC4
Gene ID: MGYG000001780_01802
Location and strand information: 163367 - 164011 (-)
Family: 3.A.1.12.5
Protein type: TC
Protein description: Lipoprotein-releasing system ATP-binding protein LolD

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_01783	hypothetical protein	CAZyme	122736	124925	+	CBM4\| GH10
MGYG000001780_01784	hypothetical protein	null	125002	125190	+	No domain
MGYG000001780_01785	Endo-1,4-beta-xylanase A	CAZyme	126193	127308	+	GH10
MGYG000001780_01786	hypothetical protein	CAZyme	127455	129413	+	GH5_21\| GH43\| GH5
MGYG000001780_01787	Endo-1,4-beta-xylanase Z	CAZyme	129636	130517	+	CE1
MGYG000001780_01788	hypothetical protein	CAZyme	130552	133776	+	GH95\| CE1\| CE6
MGYG000001780_01789	Sensor histidine kinase RcsC	TF	133851	137936	-	HTH_AraC
MGYG000001780_01790	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	138466	140544	-	GH67
MGYG000001780_01791	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	null	140566	141549	-	GFO_IDH_MocA
MGYG000001780_01792	Xylosidase/arabinosidase	CAZyme	141565	142542	-	GH43\| GH43_1\| 3.2.1.37
MGYG000001780_01793	hypothetical protein	CAZyme	142575	145310	-	GH10\| GH43_12
MGYG000001780_01794	Inner membrane symporter YicJ	TC	145328	146824	-	2.A.2.3.4
MGYG000001780_01795	hypothetical protein	CAZyme	146843	148552	-	GH35
MGYG000001780_01796	hypothetical protein	CAZyme	148795	151116	-	GH10\| CBM22
MGYG000001780_01797	hypothetical protein	null	151149	152552	-	SGBP_B_XBD
MGYG000001780_01798	SusD-like protein	null	152569	154257	-	SusD-like_3\| SusD_RagB
MGYG000001780_01799	TonB-dependent receptor SusC	TC	154281	157433	-	1.B.14.6.1
MGYG000001780_01800	Sensor histidine kinase RcsC	TF	157859	161962	+	HTH_AraC+HTH_AraC
MGYG000001780_01801	hypothetical protein	null	161971	163176	-	No domain
MGYG000001780_01802	Lipoprotein-releasing system ATP-binding protein LolD	TC	163367	164011	-	3.A.1.12.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001780_01783	GH10_e9\|CBM4_e10\|3.2.1.8	xylan
MGYG000001780_01785	GH10_e61
MGYG000001780_01786	GH5_e31\|GH43_e200\|3.2.1.8	xylan
MGYG000001780_01787	CE1_e69
MGYG000001780_01788	GH95_e0\|CE6_e7\|CE1_e61\|3.2.1.-\|3.1.1.72	xylan\|pectin
MGYG000001780_01790	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000001780_01792	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000001780_01793	GH10_e61
MGYG000001780_01795	GH35_e24
MGYG000001780_01796